Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120557379 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 22294954 ~ 22297812 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005638962.1 | True | 902 | lncRNA | 0.49 | 3 | 22294954 | 22297812 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120557376 | LOC104966918 | coding | upstream | 11971 | 22278582 ~ 22282983 (+) |
| LOC120557368 | LOC103356557,LOC104967292 | coding | upstream | 42273 | 22221298 ~ 22252681 (+) |
| col2a1b | col2a1,LOC103356561,LOC107668081,LOC107585898 | coding | upstream | 102568 | 22144371 ~ 22192386 (+) |
| LOC120558047 | ppp1r1a,LOC102206106,LOC102311133,LOC101483072 | coding | upstream | 251061 | 22006540 ~ 22043893 (+) |
| npffl | npff | coding | upstream | 294483 | 21997351 ~ 22000471 (+) |
| tespa1 | NA | coding | downstream | 964 | 22298776 ~ 22309762 (+) |
| igsf8 | LOC103356551 | coding | downstream | 57299 | 22355111 ~ 22370933 (+) |
| dctn2 | dctn2 | coding | downstream | 163679 | 22461491 ~ 22477265 (+) |
| ddit3 | ddit3 | coding | downstream | 185384 | 22483196 ~ 22487568 (+) |
| arhgap9 | arhgap9 | coding | downstream | 209515 | 22507327 ~ 22554602 (+) |
| G40923 | NA | non-coding | upstream | 20653 | 22274074 ~ 22274301 (+) |
| G40904 | NA | non-coding | upstream | 92218 | 22202126 ~ 22202736 (+) |
| G40840 | NA | non-coding | upstream | 361722 | 21911874 ~ 21933232 (+) |
| G40842 | alas1 | non-coding | upstream | 377143 | 21917243 ~ 21917811 (+) |
| G40804 | NA | non-coding | upstream | 517358 | 21713797 ~ 21777596 (+) |
| G40948 | NA | non-coding | downstream | 91366 | 22389178 ~ 22425121 (+) |
| G41021 | NA | non-coding | downstream | 256805 | 22554617 ~ 22554845 (+) |
| G41040 | NA | non-coding | downstream | 293860 | 22591672 ~ 22593083 (+) |
| G41041 | gli1 | non-coding | downstream | 297615 | 22595427 ~ 22596515 (+) |
| LOC120556826 | NA | non-coding | downstream | 478429 | 22776241 ~ 22824156 (+) |
| itga7 | itga7 | other | upstream | 302343 | 21950376 ~ 21992611 (+) |
| vgll4b | vgll4 | other | upstream | 951243 | 21295102 ~ 21343711 (+) |
| G40353 | rassf1,LOC102778369 | other | upstream | 2146264 | 20148104 ~ 20148690 (+) |
| abhd14b | abhd14b | other | upstream | 2371405 | 19917889 ~ 19923549 (+) |
| cenps | LOC103362653,LOC103137101,LOC103464519 | other | upstream | 2435613 | 19851548 ~ 19859341 (+) |
| cbfa2t2 | cbfa2t2 | other | downstream | 1437136 | 23734948 ~ 23771932 (+) |
| znfx1 | NA | other | downstream | 1550235 | 23848047 ~ 23867512 (+) |
| bloc1s1 | bloc1s1,LOC102796612 | other | downstream | 2257713 | 24555525 ~ 24560318 (+) |
| slc12a5a | LOC103355988 | other | downstream | 2910344 | 25208156 ~ 25310553 (+) |
| slc16a1a | slc16a1,LOC102208676,LOC102781600 | other | downstream | 3384595 | 25682407 ~ 25690935 (+) |
