LOC120557409


Basic Information

Item Value
gene id LOC120557409
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 26222077 ~ 26252094 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638967.1
GACCACCAAAGACTCCTGAGGAGGAAAGGGCATCTTAAAAGCGGCGTTCTGGCCCACTCTTACAATCACAGGTTTGGAGAACTTGTGAAGATCGTCTGGGTCAAATTCAGGTACCGTCGCAGTCCATGCTCATCTTCACCGCTAATTCAGCCGGATTTCCACGAAGAGCATAAACATCAGAGAGTCCACACTATTCAATATGTGGCATACCGCCTCCTGCATCTGCAAGTGgtggatcaagcctttcatagCCAATCGCAGACTCAGAGGGCTTGGAAAGCCCCATGTCATTCTTCGTATAGACCCGGAACTTATACTCCCTTCCCGGCATGATATTG

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638967.1 True 338 lncRNA 0.49 4 26222077 26252094

Neighbor

gene id symbol gene type direction distance location
LOC120557651 LOC107089162,LOC104944127,LOC103355802 coding upstream 51992 26129594 ~ 26170085 (+)
mybphb LOC103464713,LOC107089157 coding upstream 97339 26114854 ~ 26124738 (+)
nav1b nav1,LOC103355819 coding upstream 107904 26033751 ~ 26114173 (+)
pkp1b NA coding upstream 224522 25985150 ~ 25997555 (+)
smpd2b smpd2,LOC102787414 coding upstream 238034 25974025 ~ 25984043 (+)
nudt3b nudt3 coding downstream 279419 26531513 ~ 26540962 (+)
pacsin1b LOC104965611,LOC103355721 coding downstream 298723 26550817 ~ 26585593 (+)
snrpc NA coding downstream 378335 26630429 ~ 26633652 (+)
slc2a1b slc2a1,LOC108231650,LOC104928076 coding downstream 538390 26790484 ~ 26815402 (+)
si:dkey-166d12.2 LOC100709810,LOC102797006,LOC102307918,LOC103355584 coding downstream 593756 26845850 ~ 26962727 (+)
G41754 LOC102788777,LOC107089146,LOC101487148,LOC104918388,LOC100698513 non-coding upstream 194867 26026555 ~ 26027210 (+)
G41746 LOC103355883,LOC106954216,LOC104941313 non-coding upstream 219326 26001481 ~ 26002751 (+)
LOC120557323 NA non-coding upstream 299014 25921754 ~ 25923063 (+)
G41694 rplp2,LOC104941383,LOC104918380 non-coding upstream 334344 25885222 ~ 25887733 (+)
G41630 NA non-coding upstream 675237 25546509 ~ 25546840 (+)
G41827 LOC106518302,LOC101482215,LOC102196619,LOC102290668 non-coding downstream 23028 26275122 ~ 26275929 (+)
G41834 LOC104955002 non-coding downstream 72711 26324805 ~ 26338204 (+)
G41835 NA non-coding downstream 92043 26344137 ~ 26345459 (+)
LOC120557964 NA non-coding downstream 148359 26400453 ~ 26404902 (+)
G41865 tcp11 non-coding downstream 455175 26707269 ~ 26709577 (+)
LOC120558088 LOC104941431 other upstream 314339 25904769 ~ 25907738 (+)
LOC120558082 kcna10,LOC104941363 other upstream 349158 25767092 ~ 25872919 (+)
slc16a1a slc16a1,LOC102208676,LOC102781600 other upstream 531142 25682407 ~ 25690935 (+)
slc12a5a LOC103355988 other upstream 911524 25208156 ~ 25310553 (+)
bloc1s1 bloc1s1,LOC102796612 other upstream 1661759 24555525 ~ 24560318 (+)
G41825 NA other downstream 16508 26268602 ~ 26273315 (+)
G41850 rps10,LOC102793608 other downstream 290413 26542507 ~ 26548799 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other downstream 400757 26652851 ~ 26764737 (+)
ephb2b LOC104917933,LOC103376520 other downstream 1418869 27670963 ~ 27823260 (+)
G42449 NA other downstream 2988319 29240413 ~ 29242253 (+)

Expression


Co-expression Network