LOC120557696


Basic Information

Item Value
gene id LOC120557696
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 39099985 ~ 39100496 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639003.1
gtctacatGTCACTCAAGAGGATCTAGGTCAAGGGGCGTGGCCACTCTCACCTGCTCTGCTCCAGCCAGCTGCAGATCATTCCAGTAATCAACCAACACCCAGCTGCAGCTCATTCCAGTACTCAACCAACAGTTATCTACCCGGGCTGTTCACCTCTTCAGCGCCAGTTCGTTGCAACCATTCCTGTGATCCCGCCTCTGGACCTGCTGCTTTTCGGTTCTCATCTGCCTCCTCGCTGCCTGCTCACCTCGCAACTCCGTTCTCAACCAGCCTTTCCAACCAGCTCTCGTCTTCGCTGCCTGGCCACACACCCGCCGTCTGATCTCCAGCTTCGACTCCACCTGGAGCTGCTCTCCTGGCCATTCCCTCCTGCACTATCCACATTGTGTCCAATAAAACACTGCTAACCGct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639003.1 True 413 lncRNA 0.56 2 39099985 39100496

Neighbor

gene id symbol gene type direction distance location
LOC120557678 NA coding upstream 152135 38945407 ~ 38947850 (+)
LOC120557116 NA coding upstream 157168 38941572 ~ 38942817 (+)
LOC120557676 NA coding upstream 186455 38897360 ~ 38913530 (+)
LOC120557663 NA coding upstream 213557 38857167 ~ 38886428 (+)
rbpjl rbpjl,LOC100707106 coding upstream 315927 38734167 ~ 38784058 (+)
LOC120557683 NA coding downstream 22292 39122788 ~ 39142350 (+)
LOC120557665 NA coding downstream 148670 39249166 ~ 39276979 (+)
LOC120557118 NA coding downstream 194141 39294637 ~ 39313682 (+)
LOC120557124 NA coding downstream 690515 39791011 ~ 40446646 (+)
LOC120557127 NA coding downstream 1454454 40554950 ~ 40583705 (+)
G44499 NA non-coding upstream 111452 38988068 ~ 38988533 (+)
G44489 NA non-coding upstream 258752 38841034 ~ 38841233 (+)
G44488 NA non-coding upstream 274966 38824675 ~ 38825019 (+)
LOC120557691 NA non-coding upstream 286541 38806446 ~ 38813444 (+)
G44454 NA non-coding upstream 386162 38709982 ~ 38713823 (+)
LOC120557694 NA non-coding downstream 103173 39203669 ~ 39205218 (+)
G44527 NA non-coding downstream 398603 39499099 ~ 39865513 (+)
LOC120557693 NA non-coding downstream 508225 39608721 ~ 39610204 (+)
LOC120557690 NA non-coding downstream 544259 39644755 ~ 39646601 (+)
LOC120557689 NA non-coding downstream 552782 39653278 ~ 39655738 (+)
LOC120557670 NA other upstream 118252 38953118 ~ 38981733 (+)
LOC120557667 LOC102775714,LOC103375741 other upstream 196929 38900572 ~ 38903056 (+)
G44436 NA other upstream 487014 38612637 ~ 38612971 (+)
LOC120557027 NA other upstream 925491 38166182 ~ 38174494 (+)
plekha6 plekha6 other upstream 1003913 37960706 ~ 38096072 (+)
LOC120557680 NA other downstream 646677 39747173 ~ 39774250 (+)
G44581 NA other downstream 713464 39813960 ~ 39821908 (+)
LOC120557666 NA other downstream 1055712 40156208 ~ 40431341 (+)
G44690 NA other downstream 1380180 40480676 ~ 40506570 (+)
LOC120557692 NA other downstream 1403698 40504194 ~ 40506056 (+)

Expression


Co-expression Network