LOC120557698


Basic Information

Item Value
gene id LOC120557698
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 40759809 ~ 40772434 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639005.1
AACAACGGTCgagatggtcagagtgaagagTTCAAAGGTCGAGTCTCTCATTTTCCAGAAGAAGTGAAACACGGCAACGCCTCCATAATCATCAGAAATACAAAGATATCTGACAGCGGAGAATACACCTGTGATTTTCCTCGTCTTCAGCCACCTCAAAAATTCAACATTAAGCTTGTTGTTTATCCTGTCTTAAAAGACAGAAGAAGGGAAAACATCCGAGttaaAGGACCAGAGAAAACCTCAGGGTCTCCCAATGTTGGATTGTTGGATGTTGCATTGATTGTTTCATTTATTGGATTAATTGGAACGATTGTTGCTGCagcagtttttgttgttgttgttattcttGAAATTAGGCAAcccaattataaaaaagGATCACAAGACCCAGGAAACCCACCTAG

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process
GO:0035725 sodium ion transmembrane transport biological_process

KEGG:

id description
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639005.1 True 407 lncRNA 0.40 5 40759809 40772434

Neighbor

gene id symbol gene type direction distance location
LOC120557681 NA coding upstream 25332 40721696 ~ 40734477 (+)
LOC120557684 NA coding upstream 43688 40684822 ~ 40716121 (+)
LOC120557675 LOC107573218 coding upstream 112295 40645188 ~ 40647514 (+)
LOC120557127 NA coding upstream 176104 40554950 ~ 40583705 (+)
LOC120557124 NA coding upstream 313163 39791011 ~ 40446646 (+)
LOC120556655 NA coding downstream 34794 40807228 ~ 40821097 (+)
LOC120557310 NA coding downstream 100415 40872849 ~ 40914254 (+)
LOC120557311 NA coding downstream 189274 40961708 ~ 40989920 (+)
LOC120557130 NA coding downstream 585707 41358141 ~ 41360354 (+)
LOC120556884 NA coding downstream 590069 41362503 ~ 41365014 (+)
G44713 NA non-coding upstream 4606 40737276 ~ 40755203 (+)
G44622 NA non-coding upstream 40594 40699060 ~ 40719215 (+)
LOC120557700 NA non-coding upstream 103163 40655859 ~ 40656646 (+)
LOC120557699 NA non-coding upstream 150245 40601428 ~ 40609564 (+)
G44637 NA non-coding upstream 156772 40602563 ~ 40603037 (+)
G44731 NA non-coding downstream 54986 40827420 ~ 40867607 (+)
G44633 NA non-coding downstream 177487 40949921 ~ 41025342 (+)
G44751 NA non-coding downstream 273410 41045844 ~ 41077132 (+)
G44757 NA non-coding downstream 532344 41304778 ~ 41305781 (+)
G44758 NA non-coding downstream 533474 41305908 ~ 41306120 (+)
LOC120557687 NA other upstream 91067 40666199 ~ 40668742 (+)
LOC120557674 NA other upstream 211961 40519942 ~ 40547848 (+)
G44690 NA other upstream 253239 40480676 ~ 40506570 (+)
LOC120557692 NA other upstream 253753 40504194 ~ 40506056 (+)
LOC120557666 NA other upstream 328468 40156208 ~ 40431341 (+)
LOC120557312 NA other downstream 76381 40848815 ~ 40931383 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other downstream 978569 41751003 ~ 41768313 (+)
G45186 NA other downstream 1097296 41869730 ~ 41880367 (+)
dynlrb1 dynlrb1,LOC106565026 other downstream 1124561 41896995 ~ 41902631 (+)
map1lc3a map1lc3a,LOC107551126 other downstream 1133095 41905529 ~ 41912117 (+)

Expression


Co-expression Network