LOC120557700


Basic Information

Item Value
gene id LOC120557700
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 40655859 ~ 40656646 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639007.1
GTGGCTGGAGGGCAGTGCAAAGGATTTTCTAAATACAATGTCCAAAATAACAAGATTGTTTTTGttatatcttaagtttGACCAACAGTCATCAAAGTGGAAGGAGGGGCTGATGCTGTGTTACCCTGTTCTCTCAGCACCAAGGAGAACATCTTCTTTGTCTGGAGGAAAGTTGCTCAGAAAGATGATGGTCTGAAGGAGGTGTTCCTGTATGATGGAGGCATTCATTACAACAACGGTCgagatggtcagagtgaagagTTCAAAGGTCGAAGCTCTCATTTTCCAGAAGAATTGGAACACGGCAACGCCTCCATAATCATCAGAAATACAAAGATATCTGACAGCGGAGAATACACCTGTGATTTTCCTCGTCTTCAGCCACCTTAAATATTCCACATTaagcttgttgttgttgATCCTATCTTAAAAGACAGAACGGGGGAAATATCTGAAGTGAGTCCTGATTTTAACAACGTTACTCTCTACTTGTCACATGTATGTGATCACAGGCCTGATATGATTCAAAACACGTTAAATCTGGGGGATCATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639007.1 True 555 lncRNA 0.41 3 40655859 40656646

Neighbor

gene id symbol gene type direction distance location
LOC120557675 LOC107573218 coding upstream 8345 40645188 ~ 40647514 (+)
LOC120557127 NA coding upstream 72154 40554950 ~ 40583705 (+)
LOC120557124 NA coding upstream 209213 39791011 ~ 40446646 (+)
LOC120557118 NA coding upstream 1342177 39294637 ~ 39313682 (+)
LOC120557665 NA coding upstream 1378880 39249166 ~ 39276979 (+)
LOC120557684 NA coding downstream 28176 40684822 ~ 40716121 (+)
LOC120557681 NA coding downstream 65050 40721696 ~ 40734477 (+)
LOC120557677 NA coding downstream 82245 40738891 ~ 40798049 (+)
LOC120556655 NA coding downstream 150582 40807228 ~ 40821097 (+)
LOC120557310 NA coding downstream 216203 40872849 ~ 40914254 (+)
G44634 NA non-coding upstream 28548 40443873 ~ 40627311 (+)
LOC120557699 NA non-coding upstream 46295 40601428 ~ 40609564 (+)
G44637 NA non-coding upstream 52822 40602563 ~ 40603037 (+)
G44621 NA non-coding upstream 110484 40412611 ~ 40545375 (+)
G44689 NA non-coding upstream 161237 40472624 ~ 40494622 (+)
G44622 NA non-coding downstream 42414 40699060 ~ 40719215 (+)
G44711 NA non-coding downstream 57035 40713681 ~ 40938117 (+)
LOC120557697 NA non-coding downstream 60155 40716801 ~ 40775058 (+)
G44712 NA non-coding downstream 72504 40729150 ~ 40794798 (+)
G44713 NA non-coding downstream 80630 40737276 ~ 40755203 (+)
LOC120557674 NA other upstream 108011 40519942 ~ 40547848 (+)
G44690 NA other upstream 149289 40480676 ~ 40506570 (+)
LOC120557692 NA other upstream 149803 40504194 ~ 40506056 (+)
LOC120557666 NA other upstream 224518 40156208 ~ 40431341 (+)
G44581 NA other upstream 833951 39813960 ~ 39821908 (+)
LOC120557687 NA other downstream 9553 40666199 ~ 40668742 (+)
LOC120557312 NA other downstream 192169 40848815 ~ 40931383 (+)
LOC120557139 LOC106956008,LOC103153866,LOC103464266,LOC108411580,LOC102236494 other downstream 1094357 41751003 ~ 41768313 (+)
G45186 NA other downstream 1213084 41869730 ~ 41880367 (+)
dynlrb1 dynlrb1,LOC106565026 other downstream 1240349 41896995 ~ 41902631 (+)

Expression


Co-expression Network