LOC120557726


Basic Information

Item Value
gene id LOC120557726
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 29464818 ~ 29466662 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639012.1
GCCCTGACCCGCTGCCCGACGAGGAGTTAGTACCCGGCCATGCGGAGGCGGGTAACCGCGGTGTGGTGAAGTAACCGCTCGGGTCGTCATACCGCCGTGGAGGCATGTGGCTGCTCGGTTTGGTCCTCtgaggctgtgattggctgctgctGAGGATTGTCCAGAAGTTCATTTGCAGCATTGTTTCCATGGCAACTAACAAGAAAACCAAACCAGATGGACCAACAGGAAGTTCTGACCACAAAATATCTCAGTatttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639012.1 True 261 lncRNA 0.54 2 29464818 29466662

Neighbor

gene id symbol gene type direction distance location
c4h6orf89 clg5h6orf89,LOC103369827,LOC104961369,LOC104933301,LOC101474837,LOC102304616 coding upstream 257049 29200840 ~ 29207769 (+)
st3gal8 NA coding upstream 478230 28950477 ~ 28986588 (+)
LOC120557450 NA coding upstream 515491 28925722 ~ 28949327 (+)
rem1 rem1 coding upstream 549170 28904998 ~ 28915648 (+)
pnp4a LOC103367714,LOC101478937,LOC106510859 coding upstream 573458 28884576 ~ 28891360 (+)
LOC120557724 cenpp,LOC104951285 coding downstream 18505 29485167 ~ 29595866 (+)
zgc:153675 LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637 coding downstream 163437 29630099 ~ 29636640 (+)
hgh1 hgh1 coding downstream 172944 29639606 ~ 29657185 (+)
nisch NA coding downstream 203807 29670469 ~ 29717340 (+)
stab1 NA coding downstream 258850 29725512 ~ 29837466 (+)
G42453 LOC104927822 non-coding upstream 173073 29256755 ~ 29291745 (+)
G42441 NA non-coding upstream 236498 29225774 ~ 29228320 (+)
G42426 NA non-coding upstream 277104 29186974 ~ 29187714 (+)
G42428 NA non-coding upstream 277897 29186433 ~ 29186921 (+)
G42427 NA non-coding upstream 278443 29185780 ~ 29186375 (+)
G42536 NA non-coding downstream 194544 29661206 ~ 29661426 (+)
G42655 pdhb non-coding downstream 452101 29918763 ~ 29984988 (+)
G42672 NA non-coding downstream 525261 29991923 ~ 29994778 (+)
G42674 NA non-coding downstream 536011 30002673 ~ 30005924 (+)
G42675 NA non-coding downstream 542375 30009037 ~ 30010008 (+)
G42449 NA other upstream 222565 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 1641558 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 2700081 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 2916019 26542507 ~ 26548799 (+)
G41825 NA other upstream 3191503 26268602 ~ 26273315 (+)
ergic3 ergic3,LOC102788871 other downstream 642873 30109535 ~ 30135834 (+)
G43045 NA other downstream 2993470 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 3004133 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 3571272 33037934 ~ 33041311 (+)
G43277 NA other downstream 3721076 33187738 ~ 33212318 (+)

Expression


Co-expression Network