LOC120557850


Basic Information

Item Value
gene id LOC120557850
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 34158005 ~ 34159010 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639028.1
ACTGCCCATTTCTGTGACGTCCCGTTGTGTTCCGGTTTCccgtttcctgtacgggactctcacaccgcttCAAAACACAACGCGGAGTCTGATCCACGCGCACGCTTTTCTTGTTGAATCTGTCTCTATATTAGGctatacatgtgtatatatttaggtGATTCTTGTTTTGTATATAACCTTAGCCCAATAAGTAagGGCCCAGCTGTCCCAGTGGAAGTTTAAGCTCTCTGAGCCGAATCGGAGGACCCCGTCCCGGTGGTTCCCTTCAGAAACGGGAGGGGAGGACGGCGTGCCGCGCTGCAGCGGCTGCTGCCGTACATCAAAAACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639028.1 True 331 lncRNA 0.52 3 34158005 34159010

Neighbor

gene id symbol gene type direction distance location
LOC120557827 NA coding upstream 90663 34047432 ~ 34067342 (+)
znf831 NA coding upstream 117722 34026311 ~ 34040283 (+)
barx1 barx1 coding upstream 392497 33760090 ~ 33765508 (+)
LOC120557830 LOC105888650,LOC105896821,LOC101068541,LOC103395674,LOC106527799 coding upstream 639881 33516838 ~ 33518124 (+)
LOC120557832 LOC106528837,LOC107102779 coding upstream 653697 33503798 ~ 33504308 (+)
LOC120557093 NA coding downstream 211219 34370229 ~ 34371094 (+)
LOC120557490 NA coding downstream 845932 35004942 ~ 35006128 (+)
ube2v1 LOC103133159,LOC106912622,LOC102222270,LOC103465507,LOC104930303,LOC106519068 coding downstream 1004474 35163484 ~ 35199996 (+)
LOC120556883 LOC104930311,LOC103370811,LOC104960357,LOC100711115,LOC101474327 coding downstream 1116087 35275097 ~ 35278434 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding downstream 1157467 35316477 ~ 35319169 (+)
G43514 NA non-coding upstream 10937 34075871 ~ 34147068 (+)
G43512 NA non-coding upstream 86933 34070870 ~ 34071072 (+)
G43474 NA non-coding upstream 201849 33955957 ~ 33956156 (+)
G43452 NA non-coding upstream 289458 33867580 ~ 33868547 (+)
LOC120557846 samd3,LOC101476819 non-coding upstream 372870 33784327 ~ 33785135 (+)
G43533 NA non-coding downstream 15499 34174509 ~ 34174806 (+)
G43537 NA non-coding downstream 35018 34194028 ~ 34194326 (+)
LOC120557849 NA non-coding downstream 64422 34223432 ~ 34229932 (+)
LOC120557848 NA non-coding downstream 172434 34331444 ~ 34333902 (+)
G43595 NA non-coding downstream 236903 34395913 ~ 34396336 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 812199 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 821238 33262195 ~ 33336767 (+)
G43277 NA other upstream 945687 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 1116694 33037934 ~ 33041311 (+)
G43051 LOC102201960 other upstream 1686400 32470795 ~ 32471605 (+)
G43656 NA other downstream 506226 34665236 ~ 34667182 (+)
LOC120556915 NA other downstream 1304762 35463772 ~ 35486235 (+)
G43924 NA other downstream 1505133 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 1803529 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 2544245 36703255 ~ 36711295 (+)

Expression


Co-expression Network