trnae-cuc_5


Basic Information

Item Value
gene id trnae-cuc_5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 8642030 ~ 8642101 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_186
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGccgcggcccgggttcgattcccggtCAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_186 True 72 tRNA 0.65 1 8642030 8642101

Neighbor

gene id symbol gene type direction distance location
trnae-cuc_4 NA coding upstream 24961 8616998 ~ 8617069 (+)
gata2a LOC103359878,LOC102204047,LOC100705840,LOC101487525,LOC102779036 coding upstream 145371 8483190 ~ 8496659 (+)
rpn1 rpn1,LOC107091506 coding upstream 168008 8466600 ~ 8474022 (+)
hmces hmces coding upstream 188714 8450701 ~ 8453316 (+)
si:dkey-202e22.2 LOC104952071,LOC103375511 coding upstream 307176 8329315 ~ 8334854 (+)
trnae-cuc_6 NA coding downstream 68908 8711009 ~ 8711080 (+)
trnae-cuc_7 NA coding downstream 96866 8738967 ~ 8739038 (+)
trnae-cuc_8 NA coding downstream 99605 8741706 ~ 8741777 (+)
uba3 LOC104944983 coding downstream 149639 8791740 ~ 8798039 (+)
tmf1 tmf1 coding downstream 156272 8798373 ~ 8810394 (+)
G36890 NA non-coding upstream 29043 8612296 ~ 8612987 (+)
G36887 LOC101487045 non-coding upstream 30942 8610361 ~ 8611088 (+)
G36836 NA non-coding upstream 196439 8445392 ~ 8445591 (+)
G36827 LOC100705312,LOC102203484,LOC101465335,LOC104933013 non-coding upstream 216499 8422173 ~ 8425531 (+)
G36826 LOC100705312 non-coding upstream 222449 8418304 ~ 8419581 (+)
LOC120558080 NA non-coding downstream 243672 8885773 ~ 8940038 (+)
G36988 NA non-coding downstream 397362 9039463 ~ 9039769 (+)
G36991 NA non-coding downstream 587979 9230080 ~ 9230363 (+)
G36990 NA non-coding downstream 588363 9230464 ~ 9230954 (+)
G37023 NA non-coding downstream 717403 9359504 ~ 9410661 (+)
G36744 NA other upstream 413310 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 1335687 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 1369662 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 1454816 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 2003507 6635280 ~ 6638523 (+)
prickle2b prickle2 other downstream 1118132 9760233 ~ 9856656 (+)
G37197 NA other downstream 1663086 10305187 ~ 10309996 (+)
glrx glrx other downstream 1745807 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 2355129 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 2709977 11352078 ~ 11352387 (+)

Expression


Co-expression Network