trnae-cuc_12


Basic Information

Item Value
gene id trnae-cuc_12
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 8822237 ~ 8822308 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_197
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGccgcggcccgggttcgattcccggtCAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_197 True 72 tRNA 0.65 1 8822237 8822308

Neighbor

gene id symbol gene type direction distance location
trnar-acg_14 NA coding upstream 5840 8816325 ~ 8816397 (+)
tmf1 tmf1 coding upstream 11843 8798373 ~ 8810394 (+)
trnar-acg_13 NA coding upstream 14549 8807616 ~ 8807688 (+)
uba3 LOC104944983 coding upstream 24198 8791740 ~ 8798039 (+)
trnae-cuc_8 NA coding upstream 80460 8741706 ~ 8741777 (+)
trnae-cuc_13 NA coding downstream 352 8822660 ~ 8822731 (+)
tafa4b LOC108244092,LOC101483849,LOC102775681 coding downstream 9956 8832264 ~ 8872166 (+)
suclg2 suclg2 coding downstream 282028 9104336 ~ 9229981 (+)
lrig1 lrig1 coding downstream 537883 9360191 ~ 9398603 (+)
magi1b magi1 coding downstream 672976 9495284 ~ 9650337 (+)
G36900 NA non-coding upstream 161960 8624721 ~ 8660277 (+)
G36890 NA non-coding upstream 209250 8612296 ~ 8612987 (+)
G36887 LOC101487045 non-coding upstream 211149 8610361 ~ 8611088 (+)
G36836 NA non-coding upstream 376646 8445392 ~ 8445591 (+)
G36827 LOC100705312,LOC102203484,LOC101465335,LOC104933013 non-coding upstream 396706 8422173 ~ 8425531 (+)
LOC120558080 NA non-coding downstream 63465 8885773 ~ 8940038 (+)
G36988 NA non-coding downstream 217155 9039463 ~ 9039769 (+)
G36991 NA non-coding downstream 407772 9230080 ~ 9230363 (+)
G36990 NA non-coding downstream 408156 9230464 ~ 9230954 (+)
G37023 NA non-coding downstream 537196 9359504 ~ 9410661 (+)
G36744 NA other upstream 593517 8227762 ~ 8228720 (+)
hcfc1a hcfc1,LOC102799381,LOC102206223 other upstream 1515894 7288907 ~ 7306343 (+)
G36458 LOC100304472,LOC107385856 other upstream 1549869 7209996 ~ 7272368 (+)
si:dkey-245f22.3 NA other upstream 1635023 7183199 ~ 7187214 (+)
setmar LOC100698471 other upstream 2183714 6635280 ~ 6638523 (+)
prickle2b prickle2 other downstream 937925 9760233 ~ 9856656 (+)
G37197 NA other downstream 1482879 10305187 ~ 10309996 (+)
glrx glrx other downstream 1565600 10387908 ~ 10396187 (+)
G37397 LOC102299939,LOC103353648,LOC103366902,LOC102208776,LOC100700987,LOC104921056 other downstream 2174922 10997230 ~ 11012909 (+)
G37525 evc2 other downstream 2529770 11352078 ~ 11352387 (+)

Expression


Co-expression Network