LOC120556915


Basic Information

Item Value
gene id LOC120556915
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35463772 ~ 35486235 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_205
AGGATCAGTTCCTCAGCTGATACGACAAGAAAGCTCATTGTGTTGGTGGGGGCAGATGTGACTCTCAGCTGCCGGTTTGATAAACTGTCCAAGCTGTTGGAGTTGAGCACTCTAACCATTGAGTGGAACATGGTGGATAAACATGCAGAGAAGAGCGTCGTGTACACTTTTGAGGATGGTAGAGCACATGGGAGCAGAGATGGCTCTGTGGTGGATAGAATGAAGTTGCTAGAAAGTGATGCCTCTCTGCAGCTTCGTAATGTGACTGTGAGAGATGAAGGGCTGTACACCTGCAGAATCATCACACCTGTGGTCTACACAGAGACCACTTCACTGGAAGTGCTGGCTCTGCCTTCAGTGTTTCTCCCAGAAAAGGCAGCAGTGACAGAGGGGGAGGAGAAGACCATACAGTGTGACATCACAGGTTTCTATCCAGAGAAACTTGCCGTGACATGGCTCATCCAAAATGGCTCCCACACTGTCCACGCAGGTGCCAACCACCTCTCCCGTGTCTGCACCGAAATGGCCATTCACAATCCAGATGGCACCTACAGTATTCGCAGTGGCCTCACACTGCACTCGTCAGCAGTGAAAGATGCAGAGATACACATAATCTGCCAGGTGGAGCACCAGACTTACAGCCGGCCGTACAGCAGATTTGTTACACTGACTGTTCAGGCGCCATCACAGCCTCTTTACAGTGCTGTCACACTGATAGCTGTCACCAGTGTcatcagtctgctgctggtcaCCTCTGTCATTGGAGGCGCGTTGATTCTCTACAGGTATTTCTGTAAAGCTCCACCAAGTGTTTCTGAAATCAGCCAACCCAGCATCATATATGCTCAGGTGCAGACCGACCTCAAATGCACCATCCGAGGAGCAAGACAGCAGGAGCTTAAAGTGAAATGGTTTAAATTAAGAAGCAGCGCAGACTCAGTGGTCCAGTCAGAATCTGATCCCCTGTTGGTCAGTGAGGATCTGAGTGAACAGGCTTGTCTCCAGTCAGATGGCACACACCACACATCTGTCCtgactgtgtgtctgactgtcaATGAAGACCTGACCAAATACCAGTGTGTGGTGCTGTGCAGGGGCAAGAGCGTCAGCAGAAAGACCACAGTCCAGGTGAAAGTGGAGCCGTCTTTCCTACAGATCTCCAGCATCCCTCAGATCCCCAAGGTGGAAAGGCTGCTGGTTCTCTGCTGTAGGGTGGAGAACTTCTACCCCCAGGACATCGACCTGGAGTGGTCCAGGAACGATGGGGAGCAGGTGTGCACCGTGAAACACTTTGGACCTTTTTCCGACCACAACCGCCTCTTCAGCGTGTGGAGTAAGATTGAGCTGGTCATGGCCAGAGAGGATGAGAGTGCCGTCTACACCTGCCGTGTTTACCACTCCAGCTTCTCTGCTCCGGGTTACAAAGATGTCCTGTACCACATCAACACTCAAGGAACTCCTCCTAATGTGATGTTCATTGACTGTGAACCGTTGTGTCCTCTGTTGAATGAAGAATGTACACTGCACCTGTGCGTCAAAGACTTCTGTCCTGAGGACGTGTCAGTGACTTGGACTAAAGATGGAGAGATGGTTTCCTGCTTCAACACTCCCCCGAGCCTAAACATCAATGGCCTCTACTCCATGTTCAGTTTTCTCAAACTCATCCCCAACAAGGATGACCAGGGCTCCAAGTTCAGGTGCCAGGTGGTCCACAGTGCCCAGAGGGAGCCTGAGGAGAGGCTCTTCACCCTGTGTGCAAGTCACAATCTGCATCTGATATCTGAAGGCTTCTGATGTCCTCACTGATCTCTTGTATTTAAATCtacatggttttatttgtgAAGGTTGGGATGCAGATTAGTAGAGATGAAACAGAGTTtggaacttaaaaaaaaaatctggtccTGTCTGCCTCTGATATGATGGGCATTGTTAAGTATCAGATACtaaaagcctagttcagcctctctctctctctctctctgggaagtatcagATACTAcagcctagttcagcctctctctctctctctctgggaagtatgcTAAAGTGTGGCTGGCCCACCAACCTCCAAACGGGGACAGTCCTGAGACATACATTCCCTTATCCAACaggttctcactcccatctcgtaaaatacggacgcttggtcaggtgcctttgtcgttgttattgacgctaaaagtctcctttagtgtcataTAACTTGCTTTAACTAAACACGCTTGAttgggactattggcgtcccttttgacgcagttaagTCAAGGAAAacgttgtgggtgggcttacgtttccatgacacacaGGAACGGggcggttgggtttagaaaaaggttgtgggtgggcttaagATTCCATGACACGCTGGAATAACGCAACGgttaaagaagaaagcgactttaggaaacgtgacaagcgggacacaaaccccgcGCTCCTgtttgaaagtcctgtgtttgacccaccTGCCACCCCAACCATTCTCCTTACATGGAATCTTCGGCCTTACATACTACACGCTAAACCCTGTGTAGCCGGTACGTtatacaaacacgctgaagaatgcctttttcgtcgctttagctgacagccactgtccaaacgtccgtattttacgagttcagagtgagaacgggttgcctTATCATGCAGTACCATTCAACATtgacattcaattcaattaaatgtatagtgtcaaatcacaacaggagtgatctcaggacactttacagatagagtaggtctagaccacactctataatagaCTCAACAATTCCCCCCCAAGAGGCTGAACTTAGTACAACAGcagcgaggaaaaacttccctATTTAAATGTAGCTACATGCCATAATGTCAGGGAAACCTGTACTCTTGGTTGTGGAAGGTTGTTAATTTCTCCATAATTTCGGATCACATTCCTAACAATGTAAGTGTGTGTCGCTGAGCTATTGGATCGATAATATCAGCTGATGTGACCAACTAATAAGATAATTATAGCTAAGTTAgataatggacaggacagcagGGGCTGAATCTCACTTCCCTTAATTGCATCAATGTTTCCtccacttgcttcccttcctcgcCTTTGAGTCTGTCCCACCGAGAAAGcatgggagagacagaggaaaccacgtgaggagaggaaacaaggaaatgtgttttagagggatgagacgtcctttgcTCTAAAgatcctgacacaccaacccgattatgggccgtcggacagtctggcgaggtcagcgactcgagtctgttcggtgtattcggtgccgtcgtcagtcggaagGGCCGTCAGCCTTCATTTGGgctgatttgacatgttgaatctgaaggcgggcagtcggactcaatgaccaatctgatctaacccggaaatgacgagcgggatgagca

Function

GO: NA

KEGG:

id description
K16349 NCR3LG1, B7H6; natural cytotoxicity triggering receptor 3 ligand 1

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_205 True 3402 C_gene_segment 0.49 7 35463772 35486235

Neighbor

gene id symbol gene type direction distance location
LOC120557477 LOC103375199,LOC104930306,LOC101473264,LOC108251201 coding upstream 11453 35426361 ~ 35452319 (+)
LOC120558245 NA coding upstream 23633 35439977 ~ 35440139 (+)
LOC120556789 LOC104930304,LOC100703713,LOC103370810,LOC102215223 coding upstream 144603 35316477 ~ 35319169 (+)
LOC120556883 LOC104930311,LOC103370811,LOC104960357,LOC100711115,LOC101474327 coding upstream 185338 35275097 ~ 35278434 (+)
ube2v1 LOC103133159,LOC106912622,LOC102222270,LOC103465507,LOC104930303,LOC106519068 coding upstream 263776 35163484 ~ 35199996 (+)
LOC120556919 NA coding downstream 31503 35517738 ~ 35519948 (+)
sypl2a LOC103367888 coding downstream 696357 36182592 ~ 36210487 (+)
atxn7l2a atxn7l2,LOC103374593 coding downstream 729850 36216085 ~ 36242866 (+)
LOC120557073 LOC103374592,LOC100706250,LOC102300861,LOC101476702,LOC102207203,LOC102780650 coding downstream 757422 36243657 ~ 36249486 (+)
camk1ga LOC108240302,LOC103373651 coding downstream 815711 36301946 ~ 36327932 (+)
G43859 NA non-coding upstream 4756 35458707 ~ 35459016 (+)
LOC120556905 NA non-coding upstream 125196 35338003 ~ 35338576 (+)
G43811 NA non-coding upstream 237124 35226402 ~ 35226648 (+)
LOC120557494 NA non-coding upstream 459004 35003472 ~ 35004768 (+)
G43737 NA non-coding upstream 465035 34996613 ~ 34998737 (+)
G43874 NA non-coding downstream 43598 35529833 ~ 35530044 (+)
G43877 NA non-coding downstream 54240 35540475 ~ 35541252 (+)
LOC120556868 NA non-coding downstream 71416 35557651 ~ 35560888 (+)
G43893 NA non-coding downstream 98966 35585201 ~ 35585406 (+)
G43896 helz2 non-coding downstream 104802 35591037 ~ 35593586 (+)
G43656 NA other upstream 796590 34665236 ~ 34667182 (+)
LOC120557806 LOC105901862,LOC101061984,LOC103047442 other upstream 2117966 33340284 ~ 33345806 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other upstream 2127005 33262195 ~ 33336767 (+)
G43277 NA other upstream 2251454 33187738 ~ 33212318 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other upstream 2422461 33037934 ~ 33041311 (+)
G43924 NA other downstream 177908 35664143 ~ 35666041 (+)
trnac-gca_18 NA other downstream 476304 35962539 ~ 35962610 (+)
fezf2 fezf2 other downstream 1217020 36703255 ~ 36711295 (+)
plekha6 plekha6 other downstream 2474471 37960706 ~ 38096072 (+)
LOC120557027 NA other downstream 2679947 38166182 ~ 38174494 (+)

Expression


Co-expression Network