G52064


Basic Information

Item Value
gene id G52064
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22254295 ~ 22254973 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69526
ATTAGGTGTGATTAAGAAAAAaggcttttacttttaataataacataaataCTTTGGTATACTTCATAAGTAGGACTTGGGCATTTGTAGTTTTTATATAGGCAaagaatgtaatgtaatgtgcctCCTATATTAATGGAAGTGAGTTGGTGGTATGGAAATAAAGTGAAAGAGAGAAATGTGACACTTACCCGGAGAAGCCACCAGTACTGCGAGGGCTTTCAGCGACGGGTGTCATACTGGGAGCCGGGGGTGAGGTTGAGCCAGCTTCcGTGCCGACTTTAGTATGGAGAGACACAGGGATATAGCCCCCAACGGGTGACGCTTGAGGTTCTGAGTAGAATTTTTTGAAAACTTCATGTTTAGGAAATTCAGGATACAGGTATGTTATGTGGTTGATGTCCCGGATGCGGTCACCAAGGCTACGGATCTCAAGATCTCTCTTGGTGAAGGGCTGGATGTTCTGGATTTTCTGTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69526 True 480 lncRNA 0.43 3 22254295 22254973

Neighbor

gene id symbol gene type direction distance location
mipa LOC103368323,LOC101065051,LOC100704616 coding upstream 5565 22246955 ~ 22248730 (+)
ptges3a LOC107390842,LOC103368333,LOC104967534,LOC100704884,LOC106525288,LOC108244561,LOC101471106 coding upstream 9532 22240482 ~ 22244763 (+)
rnd1b LOC101472065,LOC103358261,LOC100705424,LOC104932892,LOC103384592 coding upstream 40431 22203091 ~ 22213864 (+)
cacnb3b LOC103363728,LOC104967530,LOC100705687,LOC101472360 coding upstream 55185 22184296 ~ 22199110 (+)
zgc:158263 LOC104932850,LOC104967525,LOC101474144,LOC102796628 coding upstream 134686 22110987 ~ 22119609 (+)
LOC120558509 NA coding downstream 133576 22388549 ~ 22397004 (+)
LOC120559492 def6 coding downstream 246483 22501456 ~ 22515546 (+)
ppardb ppard coding downstream 262266 22517239 ~ 22524940 (+)
mkrn4 NA coding downstream 270324 22525297 ~ 22530706 (+)
fance NA coding downstream 275933 22530906 ~ 22534605 (+)
G52060 LOC104967533,LOC103368342 non-coding upstream 17113 22235156 ~ 22237182 (+)
LOC120558498 NA non-coding upstream 77884 22173144 ~ 22176411 (+)
G52035 NA non-coding upstream 116963 22111469 ~ 22137332 (+)
G52031 naa10 non-coding upstream 147350 22105645 ~ 22106945 (+)
LOC120558642 NA non-coding upstream 168062 22085266 ~ 22086233 (+)
G52054 NA non-coding downstream 85410 22340383 ~ 22346646 (+)
G52179 NA non-coding downstream 219257 22474230 ~ 22476314 (+)
G52185 NA non-coding downstream 225570 22480543 ~ 22484101 (+)
G52272 lhfpl5,LOC102777996 non-coding downstream 375621 22630594 ~ 22631144 (+)
G52287 NA non-coding downstream 470900 22725873 ~ 22726131 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 159405 22090197 ~ 22094890 (+)
avpr2aa avpr2,LOC105897269 other upstream 193650 22046763 ~ 22060645 (+)
G51926 NA other upstream 350218 21903542 ~ 21904077 (+)
LOC120559721 cacna1s,LOC103368470 other upstream 446381 21783217 ~ 21807914 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other upstream 534172 21717109 ~ 21720123 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other downstream 301356 22556329 ~ 22560328 (+)
LOC120559933 NA other downstream 307181 22562154 ~ 22562521 (+)
lamtor5 lamtor5,LOC102787529 other downstream 587071 22842044 ~ 22846938 (+)
atxn7l2b kcnc4 other downstream 736279 22991252 ~ 23068479 (+)
tmem201 tmem201,LOC102777799 other downstream 1491392 23746365 ~ 23765165 (+)

Expression


Co-expression Network