G52294


Basic Information

Item Value
gene id G52294
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22750063 ~ 22762554 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69822
AGTTTGAGTCGGAGCAGAGCGGCAGTGGTTGGTGAGCAGTAGATGGGCCGGTTGCTCCAGGTGGAGGTCAAACCCGCCGTATGGTCGCTGTGCATGTGGGACAGGAAAAACAGCCGTGTGCTTGGACACTTCCGCACATGCCAGAAGTCCACAGCCAGCGGAGTGTTCGGGATGACTTTCCCATTGACTGACATTGTCGGAGGTTTCACTGGATATCCTGCAACCAGCGGTGTAACGTTACGTTAACAGTTGACTGTTTCACTCAGAGGTGGCCCAGAGTCCAAAGGTGcactccagtctctctctaacctTGAATATCCTTTTTGATTTTGGTGCGTCAGGTTCTTACTGAAGAGACGTTGACCTGCCAGCTAGCTATTGATTGCAGCAACATGGGATGCAATCTAATATTCAGTATCCTCCTAATGTCATGCCAGGCTGCCATGTTTACGAACTATTTAGAGAGCAGCATAAGTGGGcattcattattaatgtgaTCGAGAGCCCttactgtatgtatgcattttATGTATATAGATGTTCATGTTTGTAGCTGTGCAGCATGTGTTGGATTTTATAACTACAACTATAATTgtacaagaaaataaaagtatttcacTTCACGCTTAAACtacttctttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69822 True 642 lncRNA 0.45 2 22750063 22762554

Neighbor

gene id symbol gene type direction distance location
cpne5a NA coding upstream 24471 22653501 ~ 22725592 (+)
srpk1a srpk1 coding upstream 122904 22611970 ~ 22627159 (+)
mapk14a LOC103368176,LOC104964410,LOC104939458 coding upstream 139267 22597224 ~ 22610796 (+)
elapor1 kiaa1324 coding upstream 153861 22585431 ~ 22596202 (+)
smc5 smc5 coding upstream 168478 22565944 ~ 22581585 (+)
adora1b adora1,LOC103368126,LOC101166301,LOC102200284,LOC101484151 coding downstream 29111 22791665 ~ 22795982 (+)
mmp9 mmp9 coding downstream 44369 22806923 ~ 22811471 (+)
LOC120559125 NA coding downstream 49316 22811870 ~ 22823643 (+)
LOC120559530 LOC104964419,LOC104927136 coding downstream 64077 22826631 ~ 22828548 (+)
slc16a4 slc16a4,LOC102787232 coding downstream 85431 22847985 ~ 22877262 (+)
G52288 NA non-coding upstream 20508 22726597 ~ 22729555 (+)
G52287 NA non-coding upstream 23932 22725873 ~ 22726131 (+)
G52272 lhfpl5,LOC102777996 non-coding upstream 118919 22630594 ~ 22631144 (+)
G52185 NA non-coding upstream 265962 22480543 ~ 22484101 (+)
G52179 NA non-coding upstream 273749 22474230 ~ 22476314 (+)
G52333 NA non-coding downstream 72244 22834798 ~ 22847296 (+)
G52342 rbm15 non-coding downstream 121495 22884049 ~ 22888687 (+)
G52379 ahcyl1,LOC104942237 non-coding downstream 246623 23009177 ~ 23020008 (+)
G52364 nfya non-coding downstream 258252 23020806 ~ 23023328 (+)
G52403 atp5f1 non-coding downstream 378356 23140910 ~ 23192988 (+)
LOC120559933 NA other upstream 187542 22562154 ~ 22562521 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other upstream 189735 22556329 ~ 22560328 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 655173 22090197 ~ 22094890 (+)
avpr2aa avpr2,LOC105897269 other upstream 689418 22046763 ~ 22060645 (+)
G51926 NA other upstream 845986 21903542 ~ 21904077 (+)
lamtor5 lamtor5,LOC102787529 other downstream 79490 22842044 ~ 22846938 (+)
atxn7l2b kcnc4 other downstream 228698 22991252 ~ 23068479 (+)
tmem201 tmem201,LOC102777799 other downstream 983811 23746365 ~ 23765165 (+)
ctnnbip1 ctnnbip1 other downstream 1028893 23791447 ~ 23814406 (+)
LOC120559118 LOC102791662 other downstream 2178241 24940795 ~ 24945320 (+)

Expression


Co-expression Network