G52509



Basic Information


Item Value
gene id G52509
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23447353 ~ 23447557 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU70102
AAAGGTTAAAGCAAAGTTTTCCTATAAAACACTGGAATGATAACTACACCTGGGAggatacacttttaaggtttgcTATATGGTAAAATACTTACAAATAGGTTGTCATGTTGCAGTCTGCATTCCAGCATGTTTCCTGTCAGTCAGAGTAAAGGTCCTACAAAGCAGCCGTGGGGACAAACCTGCTGCTTCATATGAAAGACAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU70102 True 205 lncRNA 0.40 1 23447353 23447557

Neighbor


gene id symbol gene type direction distance location
rerea rere coding upstream 1588 23353958 ~ 23445765 (+)
eno1a eno1 coding upstream 127669 23306704 ~ 23319684 (+)
LOC120558415 slc2a5 coding upstream 154775 23284919 ~ 23292578 (+)
gpr157 gpr157 coding upstream 165577 23277386 ~ 23281776 (+)
LOC120559183 NA coding upstream 233368 23207923 ~ 23213985 (+)
samd11 samd11 coding downstream 54765 23502322 ~ 23557887 (+)
klhl17 klhl17,LOC106572137 coding downstream 140824 23588381 ~ 23601648 (+)
plekhn1 plekhn1 coding downstream 166131 23613688 ~ 23628920 (+)
foxl2l NA coding downstream 296515 23744072 ~ 23745466 (+)
pik3cd pik3cd,LOC104956376 coding downstream 323074 23770631 ~ 23789093 (+)
LOC120558323 NA non-coding upstream 172158 23265231 ~ 23275195 (+)
G52461 NA non-coding upstream 200849 23221926 ~ 23246504 (+)
G52403 atp5f1 non-coding upstream 254365 23140910 ~ 23192988 (+)
G52364 nfya non-coding upstream 424025 23020806 ~ 23023328 (+)
G52379 ahcyl1,LOC104942237 non-coding upstream 427345 23009177 ~ 23020008 (+)
G52569 NA non-coding downstream 238795 23686352 ~ 23687361 (+)
G52604 NA non-coding downstream 341891 23789448 ~ 23790522 (+)
G52611 NA non-coding downstream 390135 23837692 ~ 23837962 (+)
G52628 tardbp,LOC106566965 non-coding downstream 562239 24009796 ~ 24011101 (+)
G52629 NA non-coding downstream 565406 24012963 ~ 24013301 (+)
atxn7l2b kcnc4 other upstream 378874 22991252 ~ 23068479 (+)
lamtor5 lamtor5,LOC102787529 other upstream 600415 22842044 ~ 22846938 (+)
LOC120559933 NA other upstream 884832 22562154 ~ 22562521 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other upstream 887025 22556329 ~ 22560328 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 1352463 22090197 ~ 22094890 (+)
tmem201 tmem201,LOC102777799 other downstream 298808 23746365 ~ 23765165 (+)
ctnnbip1 ctnnbip1 other downstream 343890 23791447 ~ 23814406 (+)
LOC120559118 LOC102791662 other downstream 1493238 24940795 ~ 24945320 (+)
G52871 LOC104956590 other downstream 1505885 24953442 ~ 24957330 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 2296032 25743589 ~ 25748321 (+)

Expression



Co-expression Network