G52604


Basic Information

Item Value
gene id G52604
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23789448 ~ 23790522 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU70232
aatacaggaatagtttgacattgtaatacacttatttgctttcttgagaaggtctagaccactctcgTGTCCATCTGTTAAATGTGACGCAGGAGTCAGCAATCTTTAGCGTATCATAACTTAGCTTAGGTTAAGACTTGAAACAGGGAAACAGCTACCTGACTCTGTTTGAATGTGACAAAATCTGCCtataccagcacctctaaagcttatTAATCAATGctttatatcttttttgtttaaGCAAAGATATCAAATAGATGTTTGGTCAAAGGCTCAGAAGAATTATATTGAAAACATGAGGCATTACAACCCAAATAATAATCTCATATTAGCCATAGACTTGTGGTTGCATTTCTCAAAATATGCTCTTTTGAAAGTGTTCTATCTCAGATgatgcagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttattttctgatatttaagtTGTGCACTGTGATTTGTATTGCATTTTTTGAACTGATGTTCCATGGGAGAAATGTCATGTTTGTACTGTCAAACACCTCTATACTTGTTTGCTGTATGATTTCATTTTATGGTGCGTTCAGAATACTTTACATGCTGTATTTCTTGCTGTCATTCATGCAAAGAAGATGATGTGATGTTCATcgcctttttattttgcattacaGTTCAGACGATCTCTACCATTGCATTTCGGTACAATGACTTTTACAGAACAGCAAGTGCAGCTGTGGATTACACAGCAAGACGTTTTACTTTCCTTGTAAGATACTGAAATATTCACTATGGAACAAGCTTTAAATATGTCACTCAGTATGGGCTCAGCTAAGTATTGCTGCTTTAAGCCAGAAGGAGTGAGTCTATTGAGTTTATGAGCTACTTTGCCAATTGTAAAATATACTGCAGTTGCCTTTTGAATTGATTGTAATTCATGAATTCTTTTAAATGGtacaaacattttaacattaaggcCTCATTTACATGTGTGCAGCTAAAACTAATAAATCATCCTGT

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU70232 True 1075 lncRNA 0.36 1 23789448 23790522

Neighbor

gene id symbol gene type direction distance location
pik3cd pik3cd,LOC104956376 coding upstream 355 23770631 ~ 23789093 (+)
foxl2l NA coding upstream 43982 23744072 ~ 23745466 (+)
plekhn1 plekhn1 coding upstream 160528 23613688 ~ 23628920 (+)
klhl17 klhl17,LOC106572137 coding upstream 187800 23588381 ~ 23601648 (+)
samd11 samd11 coding upstream 231561 23502322 ~ 23557887 (+)
clstn1 clstn1 coding downstream 59092 23849614 ~ 23890973 (+)
nmnat1 nmnat1 coding downstream 103691 23894213 ~ 23904039 (+)
rbp7a rbp7 coding downstream 113443 23903965 ~ 23905818 (+)
ube4b ube4b coding downstream 116378 23906900 ~ 23927466 (+)
kif1b kif1b coding downstream 137944 23928466 ~ 23993692 (+)
G52569 NA non-coding upstream 102087 23686352 ~ 23687361 (+)
G52509 NA non-coding upstream 341891 23447353 ~ 23447557 (+)
LOC120558323 NA non-coding upstream 514253 23265231 ~ 23275195 (+)
G52461 NA non-coding upstream 542944 23221926 ~ 23246504 (+)
G52403 atp5f1 non-coding upstream 596460 23140910 ~ 23192988 (+)
G52611 NA non-coding downstream 47170 23837692 ~ 23837962 (+)
G52628 tardbp,LOC106566965 non-coding downstream 219274 24009796 ~ 24011101 (+)
G52629 NA non-coding downstream 222441 24012963 ~ 24013301 (+)
LOC120558580 NA non-coding downstream 270541 24061063 ~ 24074008 (+)
G52728 NA non-coding downstream 479599 24270121 ~ 24274036 (+)
tmem201 tmem201,LOC102777799 other upstream 24283 23746365 ~ 23765165 (+)
atxn7l2b kcnc4 other upstream 720969 22991252 ~ 23068479 (+)
lamtor5 lamtor5,LOC102787529 other upstream 942510 22842044 ~ 22846938 (+)
LOC120559933 NA other upstream 1226927 22562154 ~ 22562521 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other upstream 1229120 22556329 ~ 22560328 (+)
ctnnbip1 ctnnbip1 other downstream 925 23791447 ~ 23814406 (+)
LOC120559118 LOC102791662 other downstream 1150273 24940795 ~ 24945320 (+)
G52871 LOC104956590 other downstream 1162920 24953442 ~ 24957330 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 1953067 25743589 ~ 25748321 (+)
G53096 ybx1 other downstream 2281063 26071585 ~ 26076664 (+)

Expression


Co-expression Network