G53445


Basic Information

Item Value
gene id G53445
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26989829 ~ 26993682 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71454
attgtgttaatCAAAAACAATCTGACATGACAATTCACAAAGACCTCTGGGAGTATTACAGTGCACAACGTTAACTTTGGCCTTCGACCTTTCACCTACAGACCACTCTACGCACACGCCACTGTTCCTTTGCCATTATATACAGAGCTCTGCTTTCCCccaaaactcacacacacaaacatacaaacacacacacacacacacacgcacaagccTCTCCTTGTGAGCTATCATATAGGGGTGCGTCACATGGCATGGGATACAACAGGAGTGATGATTGGAGGGCTGTGTGAACAACAAAGACTCTAATTGGACACTGTTCAGGAGGAGTTTTTTTGTTTACCATTGGCTGTAATGTCCACAAAAATGTTGAGGATGAGTCCTTTTCAGCAGAACATGAACAATACAGATGTAAATCTACAtttataagaaaaataaaaatccaccaCAACATATCAGCTTATCTTTGCACATAAATACataggaataataataataataatattcaacATTGTGCTTTCTTTCTCTCGCTCTGTCTTGCCACCGCACCATTGTCAAACGCGTTAGCCACTAACATTGGTCATGCAATTTCAAAAGAGCACAAAACAGCTGGCTTAAGAGAGAGACTCAAGCAAATTTGACATCACTACCAATGTAAATGATTTCTCTCGACTGCAGACAGGCAGCATCTACATCTAAAactcattttaaaaatatttttccatGTCATTTTTTTGCAGTTAATCCTGGATGTGGGGTCAAAATGAGTGTCCCTTTTACAGGAGTCAGTCAGTTCTGTTTTAAGAGTTACTTACATCTCTATAAAGAAGGTATATAAATAAGGACAAGAATTCCATACATCTAAAACCAGTCACAGACCTAGTTTGTGCTGCCTCCTTTTATCAGGGACTGTGAGAATGAAACACACCAAAAGCCAAATTTAGCCAATTTCAGTATACTGAAACTCTTTAAAAACAGGATACTTCCGCGAAATCTGTGGCAGCAACACAAAGTAGATCATAAATTCATCATAAAAATCATGAATACAAAACAGAAATGCATGTTTTATCTTACATGGCCAGTTGCTGTCTTTCATGTGGATAGACTATGATATAATAAAGTATGGTACCACAGATAGGCTTCACATCCGAGCCTTTACACACAATCAACGCTAAGGGGGCAGGCTACACACACCATGTTAGCACAGACAATCAACAAACAAGGTTTCTGTACAGATAATACACAGAGATAGATTGgactaaagacagagagaaagaagaccTTATCGTACTAATTGTCCATTAGGAAGAGATGACATCATTAAGCAGCAAAAGTCAATGATATTAATGACTGTAACACTACGTTGAAAAGTGATTCCAACAGCGTATGAAGTCAAATGGAACTTGTTTTTTTGCAGGTGAAATGCATTGTGGGTAGCACAGAACAGCTTTCTCTGCATTTTGCCGTGCTGTCTGAGGAGTCGGCAACTCGCTTATCTCATATTATTTGCATATATCTATTTATCACAAACAACATATGCAAGAACAGTGTAAAAGAGCAAGGAGTAGAATTACCGCTtagaatacaaaaacaaaatcatagCTTCACTCATAAATATCatgctaatatatatatatactgtactgtagccCAGAAACATGGGTTGTCATACTAGAGTCCACTTCCCTCTTCATCCTCATCGTACTATTGCTTCCCACCCAAACCACCATGTTCATTAATTCTTCTTAATGTTAATgcataaaacattaaacacagccaaaaataaaacccaataAATAGCTATTTTTAGTGTGAGGTTTTCGATCATGTCAAAACGCTTTTATATGCAGTTCCGATGCTTATTATAATATTTGTGTATGTTAAAGATCCCACATAACTAACACTTGTTTAGATTTAATCCTGGTCTTATTTGGAgttgtattttcttttagaGATTGACTTCTATGTCTGTACACTGTAAACATCTCATCTTTCTCTCACATCATGGAATGCCAGTAGTTTTTCCACCCCTTATTCTCTAGTGGTTTGGACCAGTAAAGCAATATAATCATATCTTGCGAGATACGACTACTCTCTAACCGCAGCGCTACATATGTaatgtgtgatttatttcactgcaACATGTCTTAATGTGCCTACGGAAACCACTAACCACAAAAACTACTATATAATATTACCAGTTTTGCAACATGCGGTTCTGCTCCACAAGCTGCCCCACGCTGCTGGCAGTCTCTACCTCGTCTGTGacattatgtaataataataataacacacaacTATGTGAAAAGTGAGGTTACTGGAAATATGTGCAACGAGATCACCACCTGAAGTTGATCAATGTAACGGTTTCTGTAGgaaaaatgttttaacaatgtgtttatttgtctgcATGCTTGTGCAATCGCACATAAAGAGTTAAATGTGTTTCCATttagagataaaaaaaagtgcTACACAAACCATGGGTTGTTAGGTTTAAATGCATCTGAGCAGAAGGGTGCATTGAGCATGTTATGACACAGGTAGGTGACCATTACTTTCCAGTATATTCCAGTTTCTCCATTCCCTCCCATTATGCGCAGCAATTAAGCCCATCATTTTTCTACATTGTTATGAAATCTTCAGGTAAGAAAAGCCGTGAGGAAAGGTCATCCAAaactttggggctgtttttgtTCTGAGTGGTGTAGTCCAGAGAGTAGGTGTTCATACTGTGAGCCACTATCCACATATAACGTGTAGCTGGCACGTAGTAGGCAAACATTAATTACCCAATGAAAGATGTGGTAATCCTGTGCGGTGAACCCATTTTCCATATACAGTCAATGGCAAAGGGAATGACAGTTGATATAAGTTTATCACCCACAGATAAAGGTGGGTTCAGTCCCATGTACCTGCTTGTACACTTGACTATGCTAGTGGAACAGTGTAAAGGGATCGTGCAGAATCAATTTGGACAGTAAGGCAACACATGCAGGGGCTGGCCAATGGGACGAGGACTCAGGGATTGGGGTACCATATAGTGGGGGCATCCATAGATAAATATACACAATAGAggaggtgttgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgcgtgtatctgtATGTTTGAACACCACCTCCAGGAGTTCTtggtctctcagtctctcatcATTCCCCTTCTTTCTCCTTGTATCAGTCATTCTTTTACCCCTCCATTTCTTTGTTTACGTTGTTACTCCCCTGCGCTGCGAGGCGCCCGAGGGTTCGGTTTCCCGTCGTTGGTCCGGCGGTTTCTCCCCTTCCTTATCTCCTGAAGATGCTTCCACTTCTTGTTAGCTGGGCGAACTGCAGGGCCCAGAGACGGGACGTCCTTCCCCGCAGCAGGAAAGGTCTTATCCCCTTGGTCACTGCCGGCGTTCTTTCGTGCCCAAACTTGCTCGCAAATCTGGTCGACGGTGCTCAGGTTAGGGTGGTCCACAAGCTGCATGAAGTCCCGGTACCAAAGCTTTTGATTGGTCATTGGGGGTCCACCTCCACTGCGGGGGTCTAATCGGACAGGGGCGTCGGAGGGTAGATTGGAGACTGAGGAGGATGTTGAAGGTACAACTTCTAAGGTGATGCCTAGTAAGGTTTGGGTGAAGCCATGTTCCATGGCGTGGCACTGGTAGATGCCGATATCTCTCTTCAGGACACGGCGAATCAGAAGGCCTCTATCTGTCTGGAGTATGCG
>TU71455
attgtgttaatCAAAAACAATCTGACATGACAATTCACAAAGACCTCTGGGAGTATTACAGTGCACAACGTTAACTTTGGCCTTCGACCTTTCACCTACAGACCACTCTACGCACACGCCACTGTTCCTTTGCCATTATATACAGAGCTCTGCTTTCCCccaaaactcacacacacaaacatacaaacacacacacacacacacacgcacaagccTCTCCTTGTGAGCTATCATATAGGGGTGCGTCACATGGCATGGGATACAACAGGAGTGATGATTGGAGGGCTGTGTGAACAACAAAGACTCTAATTGGACACTGTTCAGGAGGAGTTTTTTTGTTTACCATTGGCTGTAATGTCCACAAAAATGTTGAGGATGAGTCCTTTTCAGCAGAACATGAACAATACAGATGTAAATCTACAtttataagaaaaataaaaatccaccaCAACATATCAGCTTATCTTTGCACATAAATACataggaataataataataataatattcaacATTGTGCTTTCTTTCTCTCGCTCTGTCTTGCCACCGCACCATTGTCAAACGCGTTAGCCACTAACATTGGTCATGCAATTTCAAAAGAGCACAAAACAGCTGGCTTAAGAGAGAGACTCAAGCAAATTTGACATCACTACCAATGTAAATGATTTCTCTCGACTGCAGACAGGCAGCATCTACATCTAAAactcattttaaaaatatttttccatGTCATTTTTTTGCAGTTAATCCTGGATGTGGGGTCAAAATGAGTGTCCCTTTTACAGGAGTCAGTCAGTTCTGTTTTAAGAGTTACTTACATCTCTATAAAGAAGGTATATAAATAAGGACAAGAATTCCATACATCTAAAACCAGTCACAGACCTAGTTTGTGCTGCCTCCTTTTATCAGGGACTGTGAGAATGAAACACACCAAAAGCCAAATTTAGCCAATTTCAGTATACTGAAACTCTTTAAAAACAGGATACTTCCGCGAAATCTGTGGCAGCAACACAAAGTAGATCATAAATTCATCATAAAAATCATGAATACAAAACAGAAATGCATGTTTTATCTTACATGGCCAGTTGCTGTCTTTCATGTGGATAGACTATGATATAATAAAGTATGGTACCACAGATAGGCTTCACATCCGAGCCTTTACACACAATCAACGCTAAGGGGGCAGGCTACACACACCATGTTAGCACAGACAATCAACAAACAAGGTTTCTGTACAGATAATACACAGAGATAGATTGgactaaagacagagagaaagaagaccTTATCGTACTAATTGTCCATTAGGAAGAGATGACATCATTAAGCAGCAAAAGTCAATGATATTAATGACTGTAACACTACGTTGAAAAGTGATTCCAACAGCGTATGAAGTCAAATGGAACTTGTTTTTTTGCAGGTGAAATGCATTGTGGGTAGCACAGAACAGCTTTCTCTGCATTTTGCCGTGCTGTCTGAGGAGTCGGCAACTCGCTTATCTCATATTATTTGCATATATCTATTTATCACAAACAACATATGCAAGAACAGTGTAAAAGAGCAAGGAGTAGAATTACCGCTtagaatacaaaaacaaaatcatagCTTCACTCATAAATATCatgctaatatatatatatactgtactgtagccCAGAAACATGGGTTGTCATACTAGAGTCCACTTCCCTCTTCATCCTCATCGTACTATTGCTTCCCACCCAAACCACCATGTTCATTAATTCTTCTTAATGTTAATgcataaaacattaaacacagccaaaaataaaacccaataAATAGCTATTTTTAGTGTGAGGTTTTCGATCATGTCAAAACGCTTTTATATGCAGTTCCGATGCTTATTATAATATTTGTGTATGTTAAAGATCCCACATAACTAACACTTGTTTAGATTTAATCCTGGTCTTATTTGGAgttgtattttcttttagaGATTGACTTCTATGTCTGTACACTGTAAACATCTCATCTTTCTCTCACATCATGGAATGCCAGTAGTTTTTCCACCCCTTATTCTCTAGTGGTTTGGACCAGTAAAGCAATATAATCATATCTTGCGAGATACGACTACTCTCTAACCGCAGCGCTACATATGTaatgtgtgatttatttcactgcaACATGTCTTAATGTGCCTACGGAAACCACTAACCACAAAAACTACTATATAATATTACCAGTTTTGCAACATGCGGTTCTGCTCCACAAGCTGCCCCACGCTGCTGGCAGTCTCTACCTCGTCTGTGacattatgtaataataataataacacacaacTATGTGAAAAGTGAGGTTACTGGAAATATGTGCAACGAGATCACCACCTGAAGTTGATCAATGTAACGGTTTCTGTAGgaaaaatgttttaacaatgtgtttatttgtctgcATGCTTGTGCAATCGCACATAAAGAGTTAAATGTGTTTCCATttagagataaaaaaaagtgcTACACAAACCATGGGTTGTTAGGTTTAAATGCATCTGAGCAGAAGGGTGCATTGAGCATGTTATGACACAGGTAGGTGACCATTACTTTCCAGTATATTCCAGTTTCTCCATTCCCTCCCATTATGCGCAGCAATTAAGCCCATCATTTTTCTACATTGTTATGAAATCTTCAGGTAAGAAAAGCCGTGAGGAAAGGTCATCCAAaactttggggctgtttttgtTCTGAGTGGTGTAGTCCAGAGAGTAGGTGTTCATACTGTGAGCCACTATCCACATATAACGTGTAGCTGGCACGTAGTAGGCAAACATTAATTACCCAATGAAAGATGTGGTAATCCTGTGCGGTGAACCCATTTTCCATATACAGTCAATGGCAAAGGGAATGACAGTTGATATAAGTTTATCACCCACAGATAAAGGTGGGTTCAGTCCCATGTACCTGCTTGTACACTTGACTATGCTAGTGGAACAGTGTAAAGGGATCGTGCAGAATCAATTTGGACAGTAAGGCAACACATGCAGGGGCTGGCCAATGGGACGAGGACTCAGGGATTGGGGTACCATATAGTGGGGGCATCCATAGATAAATATACACAATAGAggaggtgttgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgcgttcgtgtgtgtgcgtgtatctgtATGTTTGAACACCACCTCCAGGAGTTCTtggtctctcagtctctcatcATTCCCCTTCTTTCTCCTTGTATCAGTCATTCTTTTACCCCTCCATTTCTTTGTTTACGTTGTTACTCCCCTGCGCTGCGAGGCGCCCGAGGGTTCGGTTTCCCGTCGTTGGTCCGGCGGTTTCTCCCCTTCCTTATCTCCTGAAGATGCTTCCACTTCTTGTTAGCTGGGCGAACTGCAGGGCCCAGAGACGGGACGTCCTTCCCCGCAGCAGGAAAGGTCTTATCCCCTTGGTCACTGCCGGCGTTCTTTCGTGCCCAAACTTGCTCGCAAATCTGGTCGACGGTGCTCAGGTTAGGGTGGTCCACAAGCTGCATGAAGTCCCGGTACCAAAGCTTTTGATTGGTCATTGGGGGTCCACCTCCACTGCGGGGGTCTAATCGGACAGGGGCGTCGGAGGGTAGATTGGAGACTGAGGAGGATGTTGAAGGTACAACTTCTAAGGTGATGCCTAGTAAGGTTTGGGTGAAGCCATGTTCCATGGCGTGGCACTGGTAGATGCCGATATCTCTCTTCAGGACACGGCGAATCAGAAGGCCTCTATCTGTCTGGAGTATGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71454 False 3808 lncRNA 0.41 2 26989829 26993682
TU71455 True 3834 lncRNA 0.41 2 26989829 26993682

Neighbor

gene id symbol gene type direction distance location
sema3bl sema3g coding upstream 26936 26901475 ~ 26962893 (+)
LOC120559520 NA coding upstream 138121 26812221 ~ 26851708 (+)
actr8 actr8 coding upstream 197435 26785790 ~ 26792394 (+)
LOC120559767 NA coding upstream 206797 26775810 ~ 26783032 (+)
cacna1db cacna1d coding upstream 234538 26659171 ~ 26755291 (+)
trnam-cau_2 NA coding downstream 382541 27376223 ~ 27376294 (+)
trnam-cau_3 NA coding downstream 385214 27378896 ~ 27378967 (+)
si:dkey-72l14.3 LOC100706739,LOC101069958,LOC103385031,LOC104952267 coding downstream 712814 27706496 ~ 27724463 (+)
trnar-ccu_1 NA coding downstream 769683 27763365 ~ 27763437 (+)
trnar-ccu_2 NA coding downstream 798810 27792492 ~ 27792564 (+)
G53418 NA non-coding upstream 166208 26820661 ~ 26823621 (+)
G53285 NA non-coding upstream 358222 26627296 ~ 26631607 (+)
LOC120559830 NA non-coding upstream 566770 26414885 ~ 26423059 (+)
G53248 LOC101164642,LOC104966947,LOC100690915,LOC102195969,LOC104926428,LOC101062277 non-coding upstream 587401 26397199 ~ 26402428 (+)
G53239 NA non-coding upstream 624992 26364442 ~ 26364837 (+)
G53455 LOC108233118,LOC101063193,LOC101159349,LOC103384990,LOC104941321,LOC103359395 non-coding downstream 144449 27138131 ~ 27207789 (+)
G53461 NA non-coding downstream 163788 27157470 ~ 27159414 (+)
G53487 NA non-coding downstream 259921 27253603 ~ 27255190 (+)
G53569 impdh2,LOC102785462 non-coding downstream 565271 27558953 ~ 27630584 (+)
G53586 arih2,LOC102785176 non-coding downstream 645164 27638846 ~ 27643964 (+)
G53305 NA other upstream 189083 26800096 ~ 26800746 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other upstream 452478 26483532 ~ 26537351 (+)
gnas gnas,LOC102796627,LOC104936173 other upstream 465941 26490442 ~ 26523888 (+)
atp5f1e NA other upstream 544939 26443050 ~ 26444890 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other upstream 606782 26378192 ~ 26383047 (+)
si:dkey-20d21.12 LOC101471973,LOC106098224,LOC107390607 other downstream 190812 27184494 ~ 27187943 (+)
G53488 NA other downstream 261692 27255374 ~ 27255716 (+)
LOC120559859 LOC101468803,LOC100690459 other downstream 418570 27412252 ~ 27417459 (+)
LOC120559343 NA other downstream 591843 27585525 ~ 27595409 (+)
bsna bsn,LOC102782891,LOC106513106 other downstream 960717 27954399 ~ 28143801 (+)

Expression


Co-expression Network