LOC120559896 (slc25a45)


Basic Information

Item Value
gene id LOC120559896
gene name slc25a45
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29350078 ~ 29355884 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU72150
GAGACCAATGTTATTTTCCAGGTCGGAGGACGGCTCGTTTTGATGAAAATGAGGTTGTAGCTTGTTGTCTCTCTTACTCCGGTAGGAAATAGGCGTCGTTTGTGTTTTAATGACGTTTGCTGGTGAGTTATTGATCCCAGAAGTTCGAATCTGtgaatatattttactttaccGAAccgaggagcagcagcaggatggtCTAGGTTGTGAAATTGTGCAAGCCATGCCTTTTTTGGAATTCATAGCTGGGAGCATTTCTGGTGCAGTTGGACTGGCAGTTGGTCATCCATTAGACACTGTGAAGGTTGCATGACACTGAAATCTATAAACATGACCAAATGCATAAAACCAGGCTAGTTTTTCTTCTGACACCTCTTATTTCATTTGTAGGTGCGCCTTCAGGCCCAGTCTGTTTAcaaagggatatttcactgtATGGCTAAAACATACTCTAATGAAGGGCTCCATGGATTCTTCAAGGGCATGGCATTTCCGGTGCTGACCACGGGCATCACCAACTCTGTTGTCTTTGGCTCTTACAGTAATGCCTTAGATTACCTCACTCAGTCTCAGCGCTGTGACCGCAATCAAGGCAAACCGGCTTCTGCTGCACAGGTCTTCACTGCCGGCTGCTTCTCAGGCCTGGTGCAGGTAAGAACACCTGACCTATACAGTACTGGATGGTTTGATGCAAAGCACCTTTGCAGGACCTTAACTGCATGATGATTGTGAGGGTTTCCCAGGACCACTATGAAACTGACCATTATCAGGGTGTGAAGACGCTCAATTCACACAGGTAATAGCAAATGTGTATAGTTTATTGTAGCATATGTGTTTTCCACCTACTCTAAGGAGAATTCAGAGtgtgtaaaaagaaaacaagaggaATGTGTAATGTGCTACTGGCCCCTAGAGGTTGCAAAGTTCATTACATCCCACAAAAAATAAGAAGAGGCCAAAGGTTCTTGTAGCAATCAACCATGTACATTTAGATATTTCCTCTATTCAGGTAAGAATTAAGCCTGATGCTTGGGCCTAAGTAAAGGCTGTAAGGTTGAAGTACAATTCAATAGTTgtcagttattttttatgtatatattaaaTTTTTATGGCTATTCcatattaatatttaatgtttgtttgtttgtttaggtATGCATCTTTCACCAAGGaaaattccacataagtgtacttattgtggcaataaaaccttttctgagTTCTGAACATACCTTGTCATTGACAGAAGTGTCAAGATCTGGTGGTGTAACCAACAggacagctctaagtacagGTGTGAATGCACTAAGGACGCATTGAGATCTGATCACTCAGACCACATTCATAGGGGTTTCAGGCCACACGTGGCCACATTCTTATAGCagtgtgtacgtgtatgtgtCCTGGGCCACATTATGGACTTCCTACTAAACTGTGAGCGGAACTACATACTCATTCAAAGTATTTCTGATGTCCCAGAAACCACTTAGAATGCAGTGTGCCCCCTAGGTTGACTGTTTTAGTCTGGCGGATGGGTCGGGTACGTCCGGCACAGTGATCACTTCACATAAAACGCTTCATTACATCATTTCCAGCAAATTTCACGGACAGCAAAACGGCATCACCGGTCTGTTTCAACTGAATGTTCTCTGTTCCAGCTCgcctaaagaaacaaaaacacctGGATGGAACTTGATATTTATCCCGGTGTTTATTACTGCCCCCGTTGACCTGGTGAAGGTGCGTCTGCAGGGTCAAACAACTGCTGACCGATACCGTGGACCCTTTCATTGTGTTGCTGTCATCCTGAAGAAGGAGGGACCCAGGGGTCTGTTCAGAGGAGGGCTGGCCCTAGCCCTGAGGGACATACCCTGCTATGGACTCTACTTTTTACCTTACGAGGTCACTCGAAAGGCTCTGACTGAGAGCGGCAAAGAGCCAGGTACGCTTGCAATATTGATGGCAGGTGGCGTGGCGGGTGTGGTGACCTGGGCTTTTGCCACGCCCATGGACGTGGTGAAAGCCCGGCTCCAGATGTCAGGGGCCGGCGGCCGGGAGTACAGAGGGGTCCTCCACTGCATGAGAGCGAGCTTCAGAGAGGAGGGACTGAGGGTCTTTTTCAAAGGCCTTCTACTGAACAGCCTGAGAGCCTTCCCCGTCAACGGCGTCACCTTCCTCAGCTACGAGAGTCTGATGAGGATTTTCTGCCCACCGACGAGATGACCTCACTCTTGACGGCGATTAGATACACTCCTTGCCATGCAAATTGAAAGATCTTTCAAAGATTttaatatacatacacaattTGACTGTAGGTCAGATATTCTCAGGGTTACTTAAAACTTGCCTTACTGGATGCCTCCACTATGATAGTTGGCAAGCTATTCCACATTGTGATGCCTCTAAACATTACAGACCTGCACACCACATCTGAACACACTTCAGCTGAACACAATAGATGAAAATGTTCAAATTCAGTTCCAGCTGATTTTCTTGTGACCTGAACTGCAGGGTTAAGCTCTTCATGTTTACTGGATATCAaatccattgttgtccaaaatgtgaatgtaaacGTTATAACTTTGTTGCAGACAGAGCCATGTTTTTcactatagttttttttattttttatttcaaagcaTTTTATTCCTCTCAACTGGACACAAACCGTGa
>XM_039801976.1
tagacggtccctgcgcactcgtctcacagccgGAGACCAATGTTATTTTCCAGGTCGGAGGACGGCTCGTTTTGATGAAAATGAGGTTGTAGCTTGTTGTCTCTCTTACTCCGGTAGGAAATAGGCGTCGTTTGTGTTTTAATGACGTTTGCTGGTGAGTTATTGATCCCAGAAGTTCGAATCTGtgaatatattttactttaccGAAccgaggagcagcagcaggatggtCTAGGTTGTGAAATTGTGCAAGCCATGCCTTTTTTGGAATTCATAGCTGGGAGCATTTCTGGTGCAGTTGGACTGGCAGTTGGTCATCCATTAGACACTGTGAAGGTGCGCCTTCAGGCCCAGTCTGTTTAcaaagggatatttcactgtATGGCTAAAACATACTCTAATGAAGGGCTCCATGGATTCTTCAAGGGCATGGCATTTCCGGTGCTGACCACGGGCATCACCAACTCTGTTGTCTTTGGCTCTTACAGTAATGCCTTAGATTACCTCACTCAGTCTCAGCGCTGTGACCGCAATCAAGGCAAACCGGCTTCTGCTGCACAGGTCTTCACTGCCGGCTGCTTCTCAGGCCTGGTGCAGGTGTTTATTACTGCCCCCGTTGACCTGGTGAAGGTGCGTCTGCAGGGTCAAACAACTGCTGACCGATACCGTGGACCCTTTCATTGTGTTGCTGTCATCCTGAAGAAGGAGGGACCCAGGGGTCTGTTCAGAGGAGGGCTGGCCCTAGCCCTGAGGGACATACCCTGCTATGGACTCTACTTTTTACCTTACGAGGTCACTCGAAAGGCTCTGACTGAGAGCGGCAAAGAGCCAGGTACGCTTGCAATATTGATGGCAGGTGGCGTGGCGGGTGTGGTGACCTGGGCTTTTGCCACGCCCATGGACGTGGTGAAAGCCCGGCTCCAGATGTCAGGGGCCGGCGGCCGGGAGTACAGAGGGGTCCTCCACTGCATGAGAGCGAGCTTCAGAGAGGAGGGACTGAGGGTCTTTTTCAAAGGCCTTCTACTGAACAGCCTGAGAGCCTTCCCCGTCAACGGCGTCACCTTCCTCAGCTACGAGAGTCTGATGAGGATTTTCTGCCCACCGACGAGATGACCTCACTCTTGACGGCGATTAGATACACTCCTTGCCATGCAAATTGAAAGATCTTTCAAAGATTttaatatacatacacaattTGACTGTAGGTCAGATATTCTCAGGGTTACTTAAAACTTGCCTTACTGGATGCCTCCACTATGATAGTTGGCAAGCTATTCCACATTGTGATGCCTCTAAACATTACAGACCTGCACACCACATCTGAACACACTTCAGCTGAACACAATAGATGAAAATGTTCAAATTCAGTTCCAGCTGATTTTCTTGTGACCTGAACTGCAGGGTTAAGCTCTTCATGTTTACTGGATATCAaatccattgttgtccaaaatgtgaatgtaaacGTTATAACTTTGTTGCAGACAGAGCCATGTTTTTcactatagttttttttattttttatttcaaagcaTTTTATTCCTCTCAACTGGACACAAACCGTGatcataaataaacaatacaaataaTGGAGA
>XM_039801977.1
agacggtccctgcgcactcgtctcacagccgGAGACCAATGTTATTTTCCAGGTCGGAGGACGGCTCGTTTTGATGAAAATGAGGTTGTAGCTTGTTGTCTCTCTTACTCCGGTAGGAAATAGGCGTCGTTTGTGTTTTAATGACGTTTGCTGGTTGTGAAATTGTGCAAGCCATGCCTTTTTTGGAATTCATAGCTGGGAGCATTTCTGGTGCAGTTGGACTGGCAGTTGGTCATCCATTAGACACTGTGAAGGTGCGCCTTCAGGCCCAGTCTGTTTAcaaagggatatttcactgtATGGCTAAAACATACTCTAATGAAGGGCTCCATGGATTCTTCAAGGGCATGGCATTTCCGGTGCTGACCACGGGCATCACCAACTCTGTTGTCTTTGGCTCTTACAGTAATGCCTTAGATTACCTCACTCAGTCTCAGCGCTGTGACCGCAATCAAGGCAAACCGGCTTCTGCTGCACAGGTCTTCACTGCCGGCTGCTTCTCAGGCCTGGTGCAGGTGTTTATTACTGCCCCCGTTGACCTGGTGAAGGTGCGTCTGCAGGGTCAAACAACTGCTGACCGATACCGTGGACCCTTTCATTGTGTTGCTGTCATCCTGAAGAAGGAGGGACCCAGGGGTCTGTTCAGAGGAGGGCTGGCCCTAGCCCTGAGGGACATACCCTGCTATGGACTCTACTTTTTACCTTACGAGGTCACTCGAAAGGCTCTGACTGAGAGCGGCAAAGAGCCAGGTACGCTTGCAATATTGATGGCAGGTGGCGTGGCGGGTGTGGTGACCTGGGCTTTTGCCACGCCCATGGACGTGGTGAAAGCCCGGCTCCAGATGTCAGGGGCCGGCGGCCGGGAGTACAGAGGGGTCCTCCACTGCATGAGAGCGAGCTTCAGAGAGGAGGGACTGAGGGTCTTTTTCAAAGGCCTTCTACTGAACAGCCTGAGAGCCTTCCCCGTCAACGGCGTCACCTTCCTCAGCTACGAGAGTCTGATGAGGATTTTCTGCCCACCGACGAGATGACCTCACTCTTGACGGCGATTAGATACACTCCTTGCCATGCAAATTGAAAGATCTTTCAAAGATTttaatatacatacacaattTGACTGTAGGTCAGATATTCTCAGGGTTACTTAAAACTTGCCTTACTGGATGCCTCCACTATGATAGTTGGCAAGCTATTCCACATTGTGATGCCTCTAAACATTACAGACCTGCACACCACATCTGAACACACTTCAGCTGAACACAATAGATGAAAATGTTCAAATTCAGTTCCAGCTGATTTTCTTGTGACCTGAACTGCAGGGTTAAGCTCTTCATGTTTACTGGATATCAaatccattgttgtccaaaatgtgaatgtaaacGTTATAACTTTGTTGCAGACAGAGCCATGTTTTTcactatagttttttttattttttatttcaaagcaTTTTATTCCTCTCAACTGGACACAAACCGTGatcataaataaacaatacaaataaTGGAGA

Function

symbol description
slc25a45 Predicted to enable acyl carnitine transmembrane transporter activity. Predicted to be involved in acyl carnitine transport and amino acid transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: solute carrier family 25 member 45 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72150 True 2673 lncRNA 0.45 6 29350107 29355852
XM_039801976.1 False 1592 mRNA 0.48 7 29350078 29355884
XM_039801977.1 False 1510 mRNA 0.48 7 29350078 29355883

Neighbor

gene id symbol gene type direction distance location
LOC120559893 LOC104921444,LOC103367276,LOC104966657,LOC106952640,LOC103151253,LOC106934176 coding downstream 12480 29323865 ~ 29337598 (-)
gabrd gabrd,LOC102778860 coding downstream 169387 29158029 ~ 29180691 (-)
LOC120559029 LOC102787320,LOC102195592,LOC100705795,LOC102314501 coding downstream 195853 29150403 ~ 29154225 (-)
dffb dffb coding downstream 832116 28510901 ~ 28517962 (-)
b3gnt7l LOC103356136,LOC104946517,LOC101486029 coding downstream 847173 28500573 ~ 28502905 (-)
LOC120559132 LOC102197101,LOC101463906,LOC102310392,LOC100702039 coding upstream 237164 29593048 ~ 29609420 (-)
ttll10 NA coding upstream 254025 29609909 ~ 29650365 (-)
mib2 mib2 coding upstream 326905 29682789 ~ 29731910 (-)
ubiad1 ubiad1 coding upstream 379057 29734941 ~ 29739193 (-)
atp13a2 NA coding upstream 427522 29783406 ~ 29804982 (-)
G53994 NA non-coding downstream 868 29348358 ~ 29349210 (-)
G53972 gnb1,gnb1b,LOC107385217,LOC103044197,LOC106516123,LOC107666091 non-coding downstream 55917 29250963 ~ 29294161 (-)
LOC120559849 NA non-coding downstream 282179 29050512 ~ 29067899 (-)
G53886 NA non-coding downstream 382003 28964643 ~ 28968075 (-)
G53881 NA non-coding downstream 428437 28921431 ~ 28921641 (-)
LOC120558378 NA non-coding upstream 7144 29363028 ~ 29373248 (-)
G53997 NA non-coding upstream 15463 29371347 ~ 29372824 (-)
G54000 NA non-coding upstream 19135 29375019 ~ 29375422 (-)
G54001 spen,LOC102775881 non-coding upstream 22064 29377948 ~ 29380326 (-)
G54005 spen non-coding upstream 29239 29385123 ~ 29385852 (-)
ajap1 ajap1 other downstream 320757 28971286 ~ 29029321 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other downstream 1163551 28153182 ~ 28186527 (-)
LOC120558759 NA other downstream 1419563 27845264 ~ 27930515 (-)
xpc xpc other downstream 1689432 27644783 ~ 27660646 (-)
hyal3 LOC103359396 other downstream 2150167 27189048 ~ 27199911 (-)
clcnk clcnka,LOC104952128,LOC102786725 other upstream 118619 29474503 ~ 29492975 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other upstream 396777 29752661 ~ 29765873 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other upstream 615312 29971196 ~ 30072699 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other upstream 2937058 32292942 ~ 32323275 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other upstream 3235099 32590983 ~ 32666459 (-)

Expression


Co-expression Network