cdk11b (LOC103366252,LOC101466870,LOC100697195)


Basic Information

Item Value
gene id cdk11b
gene name LOC103366252,LOC101466870,LOC100697195
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29752661 ~ 29765873 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU72353
AGACTTCCGGTGTGCCATAATACCGCTGCGCATACTTCAGGCGGTGGAGAGTGGACGCTGATGGGGGACGAAAAGGAGACCTGGAAAGTAAAAACTCTTGACGAAATACTACAGGAGAAAAAACGCAGAAGAGAATTAGAAGAGAGATCAGACCCCAAGCGCCAGAAAAATTTCCCACAGGGCCTTGTTCCACAGTCGGATGATCGGGAAGCCAAACGAGATACTCCGGAGGAAGGAGAACTACGGGATCAAAAGATGGAAATAACAATTCGTAATTCCCCGTACACACGGGAGGACTCAACAGAGGACAGGGGCGAGGAAGATGAATCATTAGCAATCAAGCCTCCACAGCAAATGGCAAGAAAAGACAAGTCTCACCACagaaaggaggagaagagaaaagatAAAAGACGTCATCGCAGTCACTCTGCTGAAGGAGCAGGGAAACATGTACGAcccaaagacaaagaaaaagagcGAGAGAATGATCGCAGGAAGCGTCAGTGGGAGGAAGACAAAGCCCGCCGAGACTGGGAGAGGCAGAAACGAAGGGAACAGGCCAGAGCTCATTCACGCAGAGAGAGGGACCGGCTGGAACAGCTGGAGCGCCAGCGTGAACGGGACAGAAAGCTGCGCGAACAGCAGAAAGAGCAACGGGAGCTGAAGGATCGGGAGAGGAGGGCTGAGGAGCGACGCAAAGAGCGAGGTGGTAGGCGAGAAGTGCCGTCTCACCATCGGATGCTACCTGACGAGTATGAGGATAAATCAAAACAAGGTCATCATAGCCGAAGTCCCAACCGCATACCTCGGGAGAGATCCGAACTCAGCGAACCACGGAAAAGTGCGACATCGAAGGAGGAGAAGCCAGAGGGCAAAGACCTGCTCGCAGACCTTCAGGACATCAGTGACAGTGAGAGGAAGACCAGCTCAGGAGAATCCTCCATCGCATCAGCGTCCGGCTCTGATGAAGAGGATGACGATGATGAAGAGGAGTCAAGCAGCCAGAGTGAGGGCAA
>TU72358
AATAATCCATGATGGCTACCGTTAGCCAGCTCTATCCATAATAGTTATATAATTGTCAGAAGGTGGCGCTAATAGCCaaattgtgtatatatacaatttGGCTATTATATTGGTATATATACCCCAATGGACGTTAGCATTTGCACTTTGTTTCGCTGACGTTAGCCAGCAATATCGGTTGATATTATTGTGTTTCTTCTGTTTTGTGGAAGCATTTTTCAGTCAAAGTTGAAACGATGGGTAATAGTGGCACTTGCCAGCCCACCCTATTCACTTCAGTAGAATTGACACTAAAGACTGGCGCCAATACAGAATTCTAATGACTATGAATCTTCCTTCTTTCTAAGATTCCTTGTGTTGACCAAGGAAGTAAACTGGAGGTGCATATTGTAACAGTGGGACAAACTGTAAGATTCTAATCAAATTTACTAATGATGATTCAATTTATGACAAcgtacataaaaataaaatggatgataaatggcaaaaaaaacaatgaccaACAAGTGGTAGGGTTTCTCTTTCATTCTGGATCTATTAtaactgtattgtttttttcttctgtgtaAGCCTTACTCTTCATGATTCAAATGAAGCTGAACTTAAATGACGTGGAATGAACACTTGTCttggatgtctgtgtgtgtatgtgtgtggagcAGGCGGTGGAGAGTGGACGCTGATGGGGGACGAAAAGGAGACCTGGAAAGTAAAAACTCTTGACGAAATACTACAGGAGAAAAAACGCAGAAGAGAATTAGAAGAGAGATCAGACCCCAAGCGCCAGAAAAATTTCCCACAGGGCCTTGTTCCACAGTCGGATGATCGGGAAGCCAAACGAGATACTCCGGAGGAAGGAGAACTACGGGATCAAAAGATGGAAATAACAATTCGTAATTCCCCGTACACACGGGAGGACTCAACAGAGGACAGGTCCTTGGAACTGTAGGAAACAAACATCAGTGTATTTTCAAAGTGGATGTAGTATACGTGTTATAGTTTAACAACAAAGtatgtatttcatgtatttAAAAGTGATATGAAACACAGTGTAGCTGGCTATTTAGAGTCTCACAatgttttctttacatttatGCAGGGGCGAGGAAGATGAATCATTAGCAATCAAGCCTCCACAGCAAATGGCAAGAAAAGACAAGTCTCACCACagaaaggaggagaagagaaaagatAAAAGACGTCATCGCAGTCACTCTGCTGAAGGAGCAGGGAAACATGTACGAcccaaagacaaagaaaaagagcGAGAGAATGATCGCAGGAAGCGTCAGTGGGAGGAAGACAAAGCCCGCCGAGACTGGGAGAGGCAGAAACGAAGGGAACAGGCCAGAGCTCATTCACGCAGAGAGAGGGACCGGCTGGAACAGCTGGAGCGCCAGCGTGAACGGGACAGAAAGCTGCGCGAACAGCAGAAAGAGCAACGGGAGCTGAAGGATCGGGAGAGGAGGGCTGAGGAGCGACGCAAAGAGCGAGGTGGTAGGCGAGAAGTGCCGTCTCACCATCGGATGCTACCTGACGAGTATGAGGATAAATCAAAACAAGGTCATCATAGCCGAAGTCCCAACCGCATACCTCGGGAGAGATCCGAACTCAGCGAACCACGGAAAAGTGCGACATCGAAGGAGGAGAAGCCAGAGGGCAAAGACCTGCTCGCAGACCTTCAGGACATCAGTGACAGTGAGAGGAAGACCAGCTCAGGAGAATCCTCCATCGCATCAGCGTCCGGCTCTGATGAAGAGGATGACGATGATGAAGAGGAGTCAAGCAGCCAGAGTGAGGGCAA
>XM_039800309.1
ATTCTGGATCTATTAtaactgtattgtttttttcttctgtgtaAGCCTTACTCTTCATGATTCAAATGAAGCTGAACTTAAATGACGTGGAATGAACACTTGTCttggatgtctgtgtgtgtatgtgtgtggagcAGGCGGTGGAGAGTGGACGCTGATGGGGGACGAAAAGGAGACCTGGAAAGTAAAAACTCTTGACGAAATACTACAGGAGAAAAAACGCAGAAGAGAATTAGAAGAGAGATCAGACCCCAAGCGCCAGAAAAATTTCCCACAGGGCCTTGTTCCACAGTCGGATGATCGGGAAGCCAAACGAGATACTCCGGAGGAAGGAGAACTACGGGATCAAAAGATGGAAATAACAATTCGTAATTCCCCGTACACACGGGAGGACTCAACAGAGGACAGGTCCTTGGAACTGGGCGAGGAAGATGAATCATTAGCAATCAAGCCTCCACAGCAAATGGCAAGAAAAGACAAGTCTCACCACagaaaggaggagaagagaaaagatAAAAGACGTCATCGCAGTCACTCTGCTGAAGGAGCAGGGAAACATGTACGAcccaaagacaaagaaaaagagcGAGAGAATGATCGCAGGAAGCGTCAGTGGGAGGAAGACAAAGCCCGCCGAGACTGGGAGAGGCAGAAACGAAGGGAACAGGCCAGAGCTCATTCACGCAGAGAGAGACCCCGATTGGATTCTCCTGGGTTTTTTTTGGACCACAGGGACCGGCTGGAACAGCTGGAGCGCCAGCGTGAACGGGACAGAAAGCTGCGCGAACAGCAGAAAGAGCAACGGGAGCTGAAGGATCGGGAGAGGAGGGCTGAGGAGCGACGCAAAGAGCGAGGTGGTAGGCGAGAAGTGCCGTCTCACCATCGGATGCTACCTGACGAGTATGAGGATAAATCAAAACAAGGTCATCATAGCCGAAGTCCCAACCGCATACCTCGGGAGAGATCCGAACTCAGCGAACCACGGAAAAGTGCGACATCGAAGGAGGAGAAGCCAGAGGGCAAAGACCTGCTCGCAGACCTTCAGGACATCAGTGACAGTGAGAGGAAGACCAGCTCAGGAGAATCCTCCATCGCATCAGCGTCCGGCTCTGATGAAGAGGATGACGATGATGAAGAGGAGTCAAGCAGCCAGAGTGAGGGCAAGCGAGAGCCGGAGGAGGTCGGCGGCTCGGGCGGAGACGGCAAAGTTCAAGAAGTGGTGCACTGGGCATGGTCAGTGGGAAGGTACGTAGAAGAGAAGGAAAATGGAAATCACATACTTTCAGTGCCAGAGTCCCGTTTCGATCACGACTCAGAAGAGAGCGGTGAGGacatggaggaagaggaggaggaggaggacgaggaggatgCAGGAGATGGTGACCCCACGCCTCACTCTCAAACTCATTCTCGCTCCCCCACCCCCGAAGAGAACTATATCCCAGACTCTCCTCCAATTTCACCTGTGGAGCTGAAAAAGGAGCTGCCCAAATATCTGCCTGCTTTACAGGGTTGTCGCAGTGTTGAGGAATTCCAGTGCTTGAACCGAATAGAAGAGGGAACCTATGGTGTGGTGTACAGAGCCAAGGACAAAAAGACGGATGAAATTGTGGCCTTGAAAAGATTaaagatggagaaggagaaggagggctTCCCCATTACCTCTTTAAGAGAAATCAATACAATCCTGAAAGCTCAGCACCCAAACATCGTCACAGTAAGGGAAATAGTTGTGGGAAGTAATATGGACAAGATCTACATCGTGATGAACTATGTAGAACATGACCTGAAGAGTTTGATGGAAACCATGAAGCAGCCCTTCCTGCCAGGTGAAGTAAAGACTCTGATGATTCAGCTGCTGCGAGGTGTCCGACATCTCCACGATAACTGGATTCTCCATCGTGATCTGAAGACGTCCAATCTGCTGCTGAGCCACAAGGGTATCCTCAAGATTGGCGACTTTGGTTTGGCCCGGGAGTACGGTTCGCCCCTGAAGCCCTACACCCCTGTAGTTGTGACCCTGTGGTACCGATCACCAGAGCTGCTGCTCGGAGCCAAGGAGTACTCCACAGCTGTGGACATGTGGTCAGTGGGCTGCATATTTGGCGAGCTCCTCACCCAGAAACCTCTCTTCCCTGGAAAATCTGAAATTGACCAAATTAACAAGGTTTTTAAGgATCTGGGGTCACCCAGCGAGAAGATCTGGCCTGGCTACGGCGAGCTGCCCGCTGTGAAGAAGATGACTTTTACAGAGTATCCCTACAACAATCTGCGAAAGCGCTTTGGTGCGCTGCTCTCAGATCAAGGCTTTGACCTCATGAACAAATTCCTCACCTACTGCCCCAGTAAGAGGATATTATCGGACGAGGGGCTCAAGCACGAGTACTTTCGCGAGACGCCGTTGCCTATCGAGCCGTCCATGTTCCCCACCTGGCCGGCCAAGAGCGAGCAACAGAGGGTGAAGAGAGGCACCAGTCCTCGTCCACCCGAGGGAGGCCTGGGCTACAGTCACCTGGGCGATGACGACCTCAAAGACACAGGCTTCCACCTGACAACCAGCAACCAGGGAGTGTCGGCAGTCGGTCCAGGATTTAGCCTCAAATTCTGAGCCCAAAACTGCAGGATACCTGGCTGTCGGGAGCAAACAGTTCTGGGACTTGGACGGTGTCACTGGTTTACAGCTGTAAACCAGATCCATATCTGATCAACTACAACTGTTACCAAATAGTCAGGACTGTCTCACAGCAAGACTGGTGGCTCAAACATGTTGAATCTCCCGAATTTTCGCTCGACTTTTTGGCTTGTTCTCTGTATTTTCAAGCCATTTCACCATTTTAAATGTGTCCATTTTAGCTCTTAAATAGGATACGCAACCATACATTTGTTAGAATTGTAGCTCTCATGtttgacttttgttttattttcccttTTATACTTCATGAGAGAGGACCAGATTTTCTAAATGGTTGGTATTTCCTGGCTGCCTGAGCTACTGTATAATGATGCAGCATTGGCTGTGCTTTCCATCCAGCATTATGTGAGAAATTTACTAAGGACTGTCACTTGATGACAGGGAGACGATGTTTTTggtagaaataaagtttgaaaCTTTG

Function

NR:

description
cyclin-dependent kinase 11B-like isoform X1

GO:

id name namespace
GO:0007224 smoothened signaling pathway biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08818 CDC2L; cell division cycle 2-like

RNA

RNA id representative length rna type GC content exon number start site end site
TU72353 False 1016 TUCP 0.53 9 29761074 29765873
TU72358 False 1804 TUCP 0.45 7 29761074 29765193
XM_039800309.1 True 3113 mRNA 0.50 19 29752661 29764668

Neighbor

gene id symbol gene type direction distance location
ubiad1 ubiad1 coding downstream 13468 29734941 ~ 29739193 (-)
mib2 mib2 coding downstream 20751 29682789 ~ 29731910 (-)
ttll10 NA coding downstream 102296 29609909 ~ 29650365 (-)
LOC120559132 LOC102197101,LOC101463906,LOC102310392,LOC100702039 coding downstream 143241 29593048 ~ 29609420 (-)
LOC120559893 LOC104921444,LOC103367276,LOC104966657,LOC106952640,LOC103151253,LOC106934176 coding downstream 415063 29323865 ~ 29337598 (-)
atp13a2 NA coding upstream 17533 29783406 ~ 29804982 (-)
LOC120559846 sdhb,LOC101478036,LOC102293590,LOC100705239,LOC102211954 coding upstream 40921 29806794 ~ 29810573 (-)
tmem240a tmem240,tmem240a,LOC108275582,LOC107593924,LOC107687438,LOC106572021 coding upstream 56999 29822872 ~ 29837527 (-)
bcas2 bcas2 coding upstream 81009 29846882 ~ 29850954 (-)
brpf3b LOC100699843,LOC106518910,LOC103372699,LOC104963634 coding upstream 162315 29928188 ~ 29946233 (-)
LOC120559594 NA non-coding downstream 73857 29676371 ~ 29678804 (-)
G54038 ddost,LOC107687429 non-coding downstream 229199 29521790 ~ 29523462 (-)
G54006 NA non-coding downstream 363098 29388551 ~ 29389563 (-)
G54005 spen non-coding downstream 366809 29385123 ~ 29385852 (-)
G54001 spen,LOC102775881 non-coding downstream 372335 29377948 ~ 29380326 (-)
G54185 atad3a,LOC103366266,LOC105898932 non-coding upstream 48477 29814350 ~ 29815450 (-)
G54189 NA non-coding upstream 56647 29822520 ~ 29822817 (-)
G54272 NA non-coding upstream 134687 29900560 ~ 29902720 (-)
LOC120559738 NA non-coding upstream 730167 30496040 ~ 30500331 (-)
LOC120559660 NA non-coding upstream 853393 30619266 ~ 30619890 (-)
clcnk clcnka,LOC104952128,LOC102786725 other downstream 259686 29474503 ~ 29492975 (-)
LOC120559896 slc25a45 other downstream 396777 29350078 ~ 29355884 (-)
ajap1 ajap1 other downstream 723340 28971286 ~ 29029321 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other downstream 1566134 28153182 ~ 28186527 (-)
LOC120558759 NA other downstream 1822146 27845264 ~ 27930515 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other upstream 205323 29971196 ~ 30072699 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other upstream 2527069 32292942 ~ 32323275 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other upstream 2825110 32590983 ~ 32666459 (-)
G54756 LOC107088573,LOC106566972 other upstream 3001484 32767357 ~ 32773486 (-)
G54834 NA other upstream 3114320 32880193 ~ 32887290 (-)

Expression


Co-expression Network