G54470


Basic Information

Item Value
gene id G54470
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 30889018 ~ 30889218 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU72791
tgtacAAGATGAGACAGTGTGTCTTCCTTTCAGTGTTAGTGGACGGTGTCCTTCAATGGTGAGATTCTAGATCATTCCAGCCAGCCAAGGAGGAAGAAAGAGTCCCACAGATCCCAGTATGCAGACCAGTACAAACATCCAGAGGAATATCCTGTCAATGACCATGGCCACATACTTCCAATCCTCTTTCACCTAGCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72791 True 201 lncRNA 0.47 1 30889018 30889218

Neighbor

gene id symbol gene type direction distance location
tmco4 tmco4,LOC102793724 coding downstream 230126 30650112 ~ 30658892 (-)
csde1 csde1,LOC102790132 coding downstream 258470 30612093 ~ 30630548 (-)
ampd1 ampd1 coding downstream 285865 30587509 ~ 30603153 (-)
dennd2c NA coding downstream 303366 30563560 ~ 30585652 (-)
LOC120559739 rnf223 coding downstream 341936 30541501 ~ 30547082 (-)
zgpat zgpat,LOC102796033 coding upstream 7759 30896977 ~ 30902908 (-)
LOC120559110 vstm2l,LOC101479893,LOC102782703 coding upstream 39025 30928243 ~ 30981176 (-)
ctnnbl1 ctnnbl1 coding upstream 98856 30988074 ~ 31057576 (-)
LOC120558334 NA coding upstream 224542 31113760 ~ 31125091 (-)
e2f1 e2f1,LOC102780950 coding upstream 239010 31128228 ~ 31141874 (-)
G54444 NA non-coding downstream 103221 30785093 ~ 30785797 (-)
G54414 NA non-coding downstream 182257 30655670 ~ 30706761 (-)
G54407 NA non-coding downstream 253668 30633932 ~ 30635350 (-)
LOC120559660 NA non-coding downstream 269128 30619266 ~ 30619890 (-)
LOC120559738 NA non-coding downstream 388687 30496040 ~ 30500331 (-)
G54508 NA non-coding upstream 175523 31064741 ~ 31064972 (-)
G54509 NA non-coding upstream 208762 31097980 ~ 31098185 (-)
G54549 NA non-coding upstream 346029 31235247 ~ 31235474 (-)
G54567 NA non-coding upstream 458063 31347281 ~ 31350577 (-)
G54599 NA non-coding upstream 602338 31491556 ~ 31527860 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other downstream 816319 29971196 ~ 30072699 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other downstream 1123145 29752661 ~ 29765873 (-)
clcnk clcnka,LOC104952128,LOC102786725 other downstream 1396043 29474503 ~ 29492975 (-)
LOC120559896 slc25a45 other downstream 1533134 29350078 ~ 29355884 (-)
ajap1 ajap1 other downstream 1859697 28971286 ~ 29029321 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other upstream 1403724 32292942 ~ 32323275 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other upstream 1701765 32590983 ~ 32666459 (-)
G54756 LOC107088573,LOC106566972 other upstream 1878139 32767357 ~ 32773486 (-)
G54834 NA other upstream 1990975 32880193 ~ 32887290 (-)
zgc:158296 NA other upstream 2077417 32966635 ~ 32971163 (-)

Expression


Co-expression Network