G54733


Basic Information

Item Value
gene id G54733
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 32682162 ~ 32682516 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU73106
CACTCCCCAACAGCGAGATCCATGTTCTCGAAGGAGTCGTCATACGGCTCGGAGTCTGGCTCGCTCTCTGGGTCATGATATTCAGCCAGGAAGGGGTGCGACAGTCCCTGCTTAACTGTCAGCCTCGTCTCCGGGTCCAGCAGTAACATCCCCTCCAGTAGGTCTACAGCTGGAAGCATCATAATAGAAAAAACACGTTTCAATTCTTgacaatgtatatatttattttttcattttctcaaccGTTACTTGGCCAGTTAAATCTACCAACTCAGCAGaaccattaaaggtcccatggcatgaaaacttcactttatgaggttttgtaATATTAATACGAGTTCcctcagcctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73106 True 355 lncRNA 0.46 1 32682162 32682516

Neighbor

gene id symbol gene type direction distance location
si:ch211-220i18.4 LOC103373814,LOC108233036,LOC102211047,LOC100693975,LOC102782987,LOC102291816 coding downstream 95199 32570308 ~ 32586963 (-)
cpne9 cpne9,LOC100694516,LOC101469997,LOC102776939 coding downstream 171097 32413064 ~ 32511065 (-)
LOC120559355 klf15,LOC103367789,LOC101076255 coding downstream 289619 32381884 ~ 32392543 (-)
LOC120559902 twist3b,LOC104929895,LOC103352822 coding downstream 1212377 31465768 ~ 31469785 (-)
trnaq-uug_1 NA coding downstream 1455031 31227060 ~ 31227131 (-)
LOC120558593 LOC106915442,LOC106565226,LOC103152765,LOC106947658 coding upstream 6371 32688887 ~ 32694442 (-)
krt8 LOC104959359,LOC106525573,LOC108233108,LOC107391340,LOC107088570,LOC100702817,LOC103152763 coding upstream 38317 32720833 ~ 32726627 (-)
tmem106c tmem106c,LOC108233084 coding upstream 209749 32892265 ~ 32903713 (-)
sars1 sars coding upstream 228242 32910758 ~ 32933014 (-)
LOC120559545 NA coding upstream 241334 32923850 ~ 32927539 (-)
G54731 NA non-coding downstream 6697 32675265 ~ 32675465 (-)
G54724 NA non-coding downstream 84669 32596572 ~ 32597493 (-)
G54684 NA non-coding downstream 272310 32409506 ~ 32409852 (-)
G54631 NA non-coding downstream 683090 31998533 ~ 31999072 (-)
G54629 NA non-coding downstream 689611 31992349 ~ 31992551 (-)
G54734 NA non-coding upstream 844 32683360 ~ 32686614 (-)
G54735 NA non-coding upstream 5689 32688205 ~ 32688638 (-)
LOC120558525 NA non-coding upstream 491350 33173866 ~ 33183318 (-)
LOC120558313 NA non-coding upstream 625615 33308131 ~ 33308924 (-)
G54922 NA non-coding upstream 636304 33318820 ~ 33319024 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other downstream 15703 32590983 ~ 32666459 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other downstream 358887 32292942 ~ 32323275 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other downstream 2609463 29971196 ~ 30072699 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other downstream 2916289 29752661 ~ 29765873 (-)
clcnk clcnka,LOC104952128,LOC102786725 other downstream 3189187 29474503 ~ 29492975 (-)
G54756 LOC107088573,LOC106566972 other upstream 84841 32767357 ~ 32773486 (-)
G54834 NA other upstream 197677 32880193 ~ 32887290 (-)
zgc:158296 NA other upstream 284119 32966635 ~ 32971163 (-)
lamb2 NA other upstream 873284 33555800 ~ 33614940 (-)
G55124 fam110a,LOC104960682 other upstream 1341502 34024018 ~ 34127495 (-)

Expression


Co-expression Network