G55133 (fkbp1a,LOC100705189,LOC101476936,LOC108435222,LOC103384692)


Basic Information

Item Value
gene id G55133
gene name fkbp1a,LOC100705189,LOC101476936,LOC108435222,LOC103384692
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 34097507 ~ 34107307 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU73623
gcAAGTGGAGAGCacttcttttattttaaatatgtcGTCATTGGTTTAGTCTGCATACAGTAACGTATCAGCAAATAACTACACAGCACAGAGGTGGACTGCTGCCGCACCAGTTGCAGCTTGGCCAATATGTAACATCGACGGCCACTGTCAAAATCTGACAGCCAGGCTAGCATATTCCTTCATTAAACTCCATTTAAAACTATTTATTTGAGATACAAAACCACTAGGGTGCCCGTGTGTCGGCTTCTTTTTCTACCACAACACAGACTTCAGTTAGGCATTGTGGTACTTTAACTGacactggcaaaaaaaaactgaaaaacattatCTTTCATCATAGGCTAAGCTTTGCTGATTCTCAGAGATAGAAAGTTGGCATTTGAAAAATACACGATTGAAGTTGTTACACAAAATAATGGGGGAAGTCACAATTTGATTGATTCCTCAACCCCCTTTTGTAAATTTCAAGCATTTCCTTTTTTgtctaagaaaaaaataatccaaTTGATGTGCATCAAGGCAAATCCTGTCTTTGCACTGTTCAACCTGTCTATGGCTTTAAATGGGGTTTAAGGACTTGGCGAGATGAGAAGGTGATAATAATGCAAATTGGATGCAAAGCTTTAACATGTACATACTAGGGTTTCCTTTGGGCCTAGAACATGCAGACAGGGCAAGGTAGTAACCATGTGTCTGGTGAGAATATTTAGGCACACATTAGAACTATctacaactgtgattggttctCCTTTGGGCCAATTACCCCTTTCGAGCTCACGCTTCAGTTAACAATTTAAATACAGTGACACTATATAAACATGGGCATTTAACGTAGCAAACTTAATTCCTGTGTTGCACCATGAAGGCCTCCCTGTCACTTGACATTTCCCCACAGGTAGCCACTAAATTCAACACTACGCCTTACTGTGTCTCTCTAGCAGAAACACGTCTCATTTGTTCTGATTTTCAACTGGATAGGGATACAAATGtgtgcttttcattttcttttgtacACGTTTTTGTTTCTCTAATATAACAAGCACCAGCTCTCGATCATTATAATACTAGTACGCATTGACTCATAAGAGATGAATGTCACTACTAGTGGTTCATTGGTATTTTGTACTTCTCAGCGTAACCATGCACAAccaacattttcagaaaacaaagaaaagtaaAGCGCAGTTCAAAAGAATTCAAGATTAGGAACATGGAGGTTTGAAAGGTTATGGCCCATGGTTTTTTAGGAGGAAGAATATGCTGAAAAATATAATTCACTCAGTCACAGagacaaaataacacaaactgTCATATTTGGATGAAAAAAGTAGTGGAACTATAGACTCAAGCCTCTTATAGAATCAAGTGCAGACTCTCCTAGCTTCTCTCCAGGTCATCCAGGTAGGAAGTCACacagaacaaaaaaaaaacaggtggtGAATCTGTTTCATTCCAAACCCAGCAGCTCAACGTCAAAGATGAGGGTGGCGTTAGGAGGAATGATGCCCGGGTGGCCTTTGTTTCCATAAGCGTATTCAGGTGAGCAGGTCAACTTGGCCCTTTGACCAACACTCATCTGCACTACACCCTCTTCCCAGCCTCGGATCACTTCCTGTTTGCCAATCTTGAACCTGAAAGGCTTGTCCCTATCACGAGACGAGTCAAACTTACGTCCATCTGTCAGGGAGCCAACATAATGCACCACACACGTCTGTCCTTTTTTGGGGAAAGTCCTTCCGTCGCCCGGGGTTATAGTCTCGATTTCGACtcccatttctttctttttttgcggTGTGTTCCGGAGATGTCCCTGCGCCCGGCTACGCTCTTCTTCccgcagtctgtctgtctgctcctcCAGCGGATGTtctcagctgtctgtctctctctctctctctttctgtctctctacaGGGAGGTCCAGTGtcaattatttatattatacaaCAACACTTCCGCCCGCAACCTCCAAAATAAAACCATAGACAGTGAAAGGAAAAACCCGCACAGAGGGG

Function

symbol description
fkbp1a Enables several functions, including FK506 binding activity; activin binding activity; and peptidyl-prolyl cis-trans isomerase activity. Involved in several processes, including SMAD protein complex assembly; regulation of protein metabolic process; and regulation of transmembrane receptor protein serine/threonine kinase signaling pathway. Located in Z disc; cytosol; and membrane.

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP1A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73623 True 2018 lncRNA 0.42 5 34097507 34107307

Neighbor

gene id symbol gene type direction distance location
LOC120559811 NA coding downstream 133567 33955326 ~ 33963940 (-)
taf13 taf13 coding downstream 332903 33763783 ~ 33764604 (-)
LOC120559034 NA coding downstream 366035 33730330 ~ 33731472 (-)
si:rp71-17i16.5 LOC103384699,LOC104952370 coding downstream 386740 33696847 ~ 33710767 (-)
lamb2l LOC103362005 coding downstream 413233 33618623 ~ 33684274 (-)
snphb snph,LOC102777778,LOC102297639 coding upstream 26952 34134259 ~ 34165964 (-)
slco4a1 slco4a1,LOC101478628,LOC102208188,LOC102077347,LOC102776629 coding upstream 226291 34333598 ~ 34375503 (-)
plagl2 plagl2 coding upstream 683306 34790613 ~ 34842286 (-)
LOC120559153 LOC102294427,LOC103371493,LOC108250036,LOC102794968,LOC101487634 coding upstream 780478 34887785 ~ 34899218 (-)
myt1b NA coding upstream 799130 34906437 ~ 35034952 (-)
G55128 NA non-coding downstream 15571 34080058 ~ 34081936 (-)
G55119 NA non-coding downstream 144849 33952265 ~ 33952658 (-)
G55093 NA non-coding downstream 145825 33865954 ~ 33951682 (-)
G55092 LOC104946618 non-coding downstream 147498 33916095 ~ 33950009 (-)
LOC120558540 NA non-coding downstream 222087 33857451 ~ 33875420 (-)
G55137 NA non-coding upstream 20931 34128238 ~ 34128796 (-)
G55166 NA non-coding upstream 159488 34266795 ~ 34267033 (-)
G55190 NA non-coding upstream 272758 34380065 ~ 34407170 (-)
G55203 NA non-coding upstream 449874 34557181 ~ 34557690 (-)
G55328 NA non-coding upstream 723062 34830369 ~ 34878720 (-)
G55131 NA other downstream 4389 34087970 ~ 34093118 (-)
lamb2 NA other downstream 482567 33555800 ~ 33614940 (-)
zgc:158296 NA other downstream 1126344 32966635 ~ 32971163 (-)
G54834 NA other downstream 1210217 32880193 ~ 32887290 (-)
G54756 LOC107088573,LOC106566972 other downstream 1324021 32767357 ~ 32773486 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other upstream 129259 34236566 ~ 34291069 (-)
LOC120559165 NA other upstream 1162589 35269896 ~ 35277854 (-)
G55492 NA other upstream 1297297 35404604 ~ 35409766 (-)
si:ch73-70k4.1 NA other upstream 1767315 35874622 ~ 35898736 (-)
LOC120559361 NA other upstream 2450223 36557530 ~ 36559959 (-)

Expression


Co-expression Network