G55511



Basic Information


Item Value
gene id G55511
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 35485732 ~ 35634395 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU74158
CTTTTTGGCTGATATATTGTCCTGGTTGACAGCTGCTGTGTTTCTGTGCTTCCACACAGCTGTTTCCTGAAGAGTCCGTACAGTAGAATCCCTCCAGTGGTTCACAAACTGTATCTGAGGTAGTCGTACATGCTGTCTTTATCTTTAAACCAGAACCTGTCAACACACAAAGAGGTTACATATGAAGATACTTAACTTGTATATGAAGATacttaacttttattttgtctaATCTACTAGAGAGCTACATGCTAAAAAATCAATCTTTAGTTTCATATGTTtctattaggggtggtacggttcacaaaacccatggttcagttcgtatcacggttttag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU74158 True 339 lncRNA 0.38 2 35485732 35634395

Neighbor


gene id symbol gene type direction distance location
flna LOC100702302 coding downstream 101503 35311194 ~ 35384229 (-)
emd NA coding downstream 181717 35298496 ~ 35304015 (-)
mrpl49 NA coding downstream 198522 35286360 ~ 35287210 (-)
las1l las1l,LOC103461358 coding downstream 216303 35266701 ~ 35269429 (-)
crebzf crebzf coding downstream 219659 35262964 ~ 35266073 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding upstream 618781 36253176 ~ 36270025 (-)
plch2a plch2,LOC106935153 coding upstream 638476 36272871 ~ 36447792 (-)
igf3 LOC108228312 coding upstream 947128 36581523 ~ 36588712 (-)
si:dkeyp-110g5.4 NA coding upstream 965178 36599573 ~ 36606768 (-)
lrif1 NA coding upstream 975742 36610137 ~ 36625969 (-)
LOC120559180 NA non-coding downstream 37262 35432383 ~ 35448470 (-)
G55496 NA non-coding downstream 67933 35415007 ~ 35417799 (-)
G55409 NA non-coding downstream 239185 35245657 ~ 35246547 (-)
G55400 atp2b3,LOC103376147 non-coding downstream 269113 35214088 ~ 35216619 (-)
G55396 NA non-coding downstream 308675 35176798 ~ 35177057 (-)
G55558 NA non-coding upstream 301 35634696 ~ 35665398 (-)
G55564 NA non-coding upstream 49416 35683811 ~ 35691837 (-)
G55578 NA non-coding upstream 191083 35825478 ~ 35826247 (-)
G55590 NA non-coding upstream 326535 35960930 ~ 36016130 (-)
G55599 NA non-coding upstream 448691 36083086 ~ 36083333 (-)
G55492 NA other downstream 75966 35404604 ~ 35409766 (-)
LOC120559165 NA other downstream 207878 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 1194663 34236566 ~ 34291069 (-)
G55124 fam110a,LOC104960682 other downstream 1358237 34024018 ~ 34127495 (-)
si:ch73-70k4.1 NA other upstream 240227 35874622 ~ 35898736 (-)
LOC120559361 NA other upstream 923135 36557530 ~ 36559959 (-)
G56160 NA other upstream 1047504 36681899 ~ 36724209 (-)
LOC120559655 mtch1,LOC102799640 other upstream 1088843 36723238 ~ 36744132 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other upstream 1250408 36884803 ~ 36895540 (-)

Expression



Co-expression Network