si:ch73-70k4.1


Basic Information

Item Value
gene id si:ch73-70k4.1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 35874622 ~ 35898736 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU74238
ACATATTCAAAGTCTAAACTTAAACGAAATAAGCCGTCTGTCAAAGATGTCCAGCCGGGGACGGGTTCGCGGGGAACCCTGAAGAGGAGTCCCACAGAGACAGCAGAGGCTGGGAGGGCAGCGTGGTGGACCAGCGAGCCGCTGCCGGCTGTGGAGAGTCTGTGGGCGTTGTGTGCTCTGCCGTGTCTGGAGAATCGGCACCGGGACCTGGTTCCTGATCTTCCACATCCATCTACAGCGAGACCCACAGCGCTGAGGTCCGGTGAACAGCGGTGGTGTGACCTCAGCGAAGACGTCGCTCCCTTCCCCGAACCCTCTCCACCCTCTCCGAGGACTCGCTCCAGTCCCAGCCCCTCCCCGCGGGAGCTCTCGGTGCAGACGCAGCCCGTCCCGGACCCGGCGGACAGACAGCTGTCGTCTCGCGGCAGCCAAAGGCCGCGGCCGTCCCTCCACGGCTGGGAGGGGCCGCCGTCGTCAGCCGGACCCTCGAGGGCGGGGGGGGGGGATGAGAAATAGGATTTGATGGATGATGTGATGTTAGAGAGCTGACCGACATGTGTCGGCTTGGCTTTACACCGGGCAACTGTGGTGTGGTCAGCTGCAGGTTACAAAGCCATCCACAGCACCTCTTGATCGGGACAAGTATTAACTGAAATAGTCATAAGTTAATGCAAACACGAAAACTCAAGATTCAGTGCAAATACCAAAACAGTACTTCTTGTCAATACTTTAGtttggggagggggaggagaagtAAAAACAATGCTTCAactcttgttttcattttacaaaAGTGCTCAATGCATCAGtgttaaattataaaaaaactttgtaaaaaaaaaaaaagtctgaataaaACAGTCTGGAGTTAGAAACGTTTCCTGATTTAGATCAAGACGTGTGTGACGAAATCATTCAAACAAACGAGACTAAGAACCGGATTGAGCATTTGATGCCAACTTTTGATATTTGACACTTTTCAATAGTCAAAGTTAGGGATATATTTCAGTCGGTACTCAGAAAGCTCGGAGCTTTGTTAACCAGCCCTGTAGCTGACCCTAACAGCTGGAACACACCGCACGTGTTAGTGCCGCGTAGCGcagctattttcttttttatttccgcGCACGTTATCCAATCTGACCAGCTACACCGGGCGGCgaaattacaaatcccactatggccacgccaagacccgccctacgaagcagcttgattggttggggttaggcatttgacctcgagcggcaaaggttaggatagctgattggtcaggggataggacctgtacaaatgggcttacgttaccttgcgtaagcatggacgcctggccaataaatcagtccctccagaaaaatgcgatcgcataattcaatgcataatcggccaaagtccgcatatttatgcgagGGCCACATTTCTTCAAATAgccgcacttttgccgcataaattgccgatttccgcgcaaaatatgcgggtcttgcatgatttcataatccccgcattttcgttgcaaaaaagtcacatatgccttagcagaaagttgaaaaatgttgcatttacttcagacaagagcagccattttcccctgttgccatgggaacgttatgaagtgacgtaattacgcaacgtgaacatcatcaaaaagcagggtgttgggggaatcactttttttctctttttcatcaaaccgcagttttttcAAGTTCCCACAacttcatcgcataaaattgcataaatatcccgcatattccatcgcattttttaagaaaacgtgccgcaaaatcaaggatttttgcccgcaacaatcacaaaaaaaacctcaCGCAAAaaacgcatttttctggaaggactgataaaTGCCATGGAAGGGTGGGTCTCGGTGTGGCCATAGTGTGATTTGTAATGTCGCGTCTGCGTAGGCCCGTGCGCTGCAGTGATAGTTCAGCCGTCTCCTCTATTTATTGCGCGATACGCGAGCATATGCCCAGGCAGGTAACcacatacaggaagaccacagtgcagccggatactttaccaaaataaacacatttcaaaata
>XM_039800692.1
CCACCTGACCCCAGGACGGTAGGTGGCGGTGGCGGTGGCGGTGCGGCAGCGACCCGCCAGCTGAACcgagacagagaagaagaaggaagttCCCGTTCGTCACACTAGCGCGAAATGTCGAAGATGCTGAAATCATGGCTGAAACATATTCAAAGTCTAAACTTAAACGAAATAAGCCGTCTGTCAAAGATGTCCAGCCGGGGACGGGTTCGCGGGGAACCCTGAAGAGGAGTCCCACAGAGACAGCAGAGGCTGGGAGGGCAGCGTGGTGGACCAGCGAGCCGCTGCCGGCTGTGGAGAGTCTGTGGGCGTTGTGTGCTCTGCCGTGTCTGGAGAATCGGCACCGGGACCTGGTTCCTGATCTTCCACATCCATCTACAGCGAGACCCACAGCGCTGAGGTCCGGTGAACAGCGGTGGTGTGACCTCAGCGAAGACGTCGCTCCCTTCCCCGAACCCTCTCCACCCTCTCCGAGGACTCGCTCCAGTCCCAGCCCCTCCCCGCGGGAGCTCTCGGTGCAGACGCAGCCCGTCCCGGACCCGGCGGACAGACAGCTGTCGTCTCGCGGCAGCCAAAGGCCGCGGCCGTCCCTCCACGGCTGGGAGGGGCCGCCGTCGTCAGCCGGACCCTCGAGGGCGGGGGGGGGCGAGGGGAGGAGAGGACGGGAGACCGGACCGCTTCTCACGGGCCAGGCGAAAGTGTCTGACGGCCGAGTTCCTCTGCAGAGGAAGGGGGAGgatagagaggaagaggaggggcaGAGTCGTGtcggaggagatggaggagcagcaggaggggCGGGGCTTCAAAGCTGCCCCATGTGCCTGCTGGACTTCCCTGTTGGGTTCACCCAGATGGACTGTGACGGCCACCTGGCCCAGTGTCTGTCCGAGGTGAACGTGGACATGACCTGGTGAGGCCGACGGGACGCTGGCTGGCTGCTGTCCAGGTGAAGCAgccacgcgcacacacacacgcacacacacacacacacacacacacacacacacacacacactccaggaTTGTATCGTATGAAGGAAACTCCCAGAGAGCAGCTCGCACACAGAACGCTCAGCTTTCACTGGCAGCTTACCCGGGCTGTGCACCGACAGAGAGGCTGCTGGACACGCTGGgcgtagtctcgcattgccagaccttcctccacagcgctgcggaggaaggtccatccacacaacattcctggataggagaaaaaaaaactggctcCTGGTTTATCTTTTAAACCAATGACAATTGCACGGGCAGCGCCGAGCGCACCGGACGCAGGTACGgcgcctcgggaaggaacttgttttggagaAACGTGTGCACGTTCAAGAGTTGTTTTAGGCTACGTTTACATTTGCTAACAAAATCTTTTTCTACGTTTACACCTCtgaccccgttttggtttggtgTCCGCGGGGccgtgttgcagtctcaacggccgcaaacggagacctttggaaacacCGTCGCTGACGCCAACGTTTCGCCGCCTGATTGAGTCTCATCTGTCACGACTGTCTCGTTCTGGGAGACTGAACTACTGACGTTACcgtggcaactaccagcaacggGCTGCGTATacacgctgcctcctgtttacccCGGCATGCGCATGCCCACTAtacgagaatgttgatgagatattttggtttgggcgtgttagtttaaacggagATAAGTTCTAAGTAAAAAACACTTACACGGAGTttgcttttggctcaaaactctcacgcaaaaaccaaaatgtaacaatgtaaatgtagccttagtcatgcaacagaaaactctgaatGGACagatagctgtctggattta
>XM_039800693.1
CCACCTGACCCCAGGACGGTAGGTGGCGGTGGCGGTGGCGGTGCGGCAGCGACCCGCCAGCTGAACcgagacagagaagaagaaggaagttCCCGTTCGTCACACTAGCGCGAAATGTCGAAGATGCTGAAATCATGGCTGAAACATATTCAAAGTCTAAACTTAAACGAAATAAGCCGTCTGTCAAAGATGTCCAGCCGGGGACGGGTTCGCGGGGAACCCTGAAGAGGAGTCCCACAGAGACAGCAGAGGCTGGGAGGGCAGCGTGGTGGACCAGCGAGCCGCTGCCGGCTGTGGAGAGTCTGTGGGCGTTGTGTGCTCTGCCGTGTCTGGAGAATCGGCACCGGGACCTGGTTCCTGATCTTCCACATCCATCTACAGCGAGACCCACAGCGCTGAGGTCCGGTGAACAGCGGTGGTGTGACCTCAGCGAAGACGTCGCTCCCTTCCCCGAACCCTCTCCACCCTCTCCGAGGACTCGCTCCAGTCCCAGCCCCTCCCCGCGGGAGCTCTCGGTGCAGACGCAGCCCGTCCCGGACCCGGCGGACAGACAGCTGTCGTCTCGCGGCAGCCAAAGGCCGCGGCCGTCCCTCCACGGCTGGGAGGGGCCGCCGTCGTCAGCCGGACCCTCGAGGGCGGGGGGGGGCGAGGGGAGGAGAGGACGGGAGACCGGACCGCTTCTCACGGGCCAGGCGAAAGTGTCTGACGGCCGAGTTCCTCTGCAGAGGAAGGGGGAGgatagagaggaagaggaggggcaGAGTCGTGtcggaggagatggaggagcagcaggaggggCGGGGCTTCAAAGCTGCCCCATGTGCCTGCTGGACTTCCCTGTTGGGTTCACCCAGATGGACTGTGACGGCCACCTGGCCCAGTGTCTGTCCGAGGTGAACGTGGACATGACCTGGTGAGGCCGACGGGACGCTGGCTGGCTGCTGTCCAGgctTGAATGACTTGAAAGCATTACCAGATGCAGAATGAAGAGGAGAGAACGAGGaagggacagaggagaggagggagtgaAGTGGGAGAGACAGAACAAGAGTGAGGCAAAGAAAGCAGCAGGAAATCTAGACAGCATTTGAActgctttttaaaaacaaatacttgt
>XM_039800694.1
CCACCTGACCCCAGGACGGTAGGTGGCGGTGGCGGTGGCGGTGCGGCAGCGACCCGCCAGCTGAACcgagacagagaagaagaaggaagttCCCGTTCGTCACACTAGCGCGAAATGTCGAAGATGCTGAAATCATGGCTGAAACATATTCAAAGTCTAAACTTAAACGAAATAAGCCGTCTGTCAAAGATGTCCAGCCGGGGACGGGTTCGCGGGGAACCCTGAAGAGGAGTCCCACAGAGACAGCAGAGGCTGGGAGGGCAGCGTGGTGGACCAGCGAGCCGCTGCCGGCTGTGGAGAGTCTGTGGGCGTTGTGTGCTCTGCCGTGTCTGGAGAATCGGCACCGGGACCTGGTTCCTGATCTTCCACATCCATCTACAGCGAGACCCACAGCGCTGAGGTCCGGTGAACAGCGGTGGTGTGACCTCAGCGAAGACGTCGCTCCCTTCCCCGAACCCTCTCCACCCTCTCCGAGGACTCGCTCCAGTCCCAGCCCCTCCCCGCGGGAGCTCTCGGTGCAGACGCAGCCCGTCCCGGACCCGGCGGACAGACAGCTGTCGTCTCGCGGCAGCCAAAGGCCGCGGCCGTCCCTCCACGGCTGGGAGGGGCCGCCGTCGTCAGCCGGACCCTCGAGGGCGGGGGGGGGCGAGGGGAGGAGAGGACGGGAGACCGGACCGCTTCTCACGGGCCAGGCGAAAGTGTCTGACGGCCGAGTTCCTCTGCAGAGGAAGGGGGAGgatagagaggaagaggaggggcaGAGTCGTGtcggaggagatggaggagcagcaggaggggCGGGGCTTCAAAGCTGCCCCATGTGCCTGCTGGACTTCCCTGTTGGGTTCACCCAGATGGACTGTGACGGCCACCTGGCCCAGTGTCTGTCCGAGGTGAACGTGGACATGACCTGGTGAGGCCGACGGGACGCTGGCTGGCTGCTGTCCAGagatctgaggagcagttaaccatagtcctcacaaatccaccggaggttagaacgccaacacagaggaagaggaaggtgacggacatccggccgaaaatgagaGGACATCCGGCAGAACAATCCCAGAAATTAAACATCATTGATATAGACTACTCTGGGTCATACCTCAAGGGGagagaaccagaaccaggatGATAACctctttggagaaaaaaaaacaacctttttctGCGTTATGAAAGAGGGTTAGTTTTTTAGCAGGTGCACTTTGGAAGCTCTGGTCACAATGACTGTGATGACTCCCTGCTGTCATGATGTCAGGTTATCCTCTTTAGACACTCGATCCATAATTTGGCTCCACTTGAGCGTGTGCACTTGGCCTCCGATGCCTTTGTTTCCAGCTGGTCAAGACGACCCGCTAAACTGAAATGACAATCCAGCCTGGCCTCATCAGAGACAtcgagagagagacccaaatggAACCGGGCCACATCCTCCTTTTCACAAAGCTGCTTTTTCACAGAAATATATCCGACCGTTTACATTTctgtagagctgggcgatatggacaaaaaaaaaaaaaaaatctaatatcacaatatttttgaccaaatacatcgatgtcgatattgtcGGGTTGACTAAATATTAAAACAATGAGAGTTTGGACAAATAATcgccaataatgtggatacactgactaagtgggtaaaggcaatgacgatatctagcctcacgTATCGATGTGTATATAATATCCATATGTTGCTCAGCCCTACATTTCTGTTGAAATGAATGATCGATTTAAAGCTAAAATGATGTCATGATGATCATGTTGTATTTGGAGTGTGAT
>XM_039800695.1
CCACCTGACCCCAGGACGGTAGGTGGCGGTGGCGGTGGCGGTGCGGCAGCGACCCGCCAGCTGAACcgagacagagaagaagaaggaagttCCCGTTCGTCACACTAGCGCGAAATGTCGAAGATGCTGAAATCATGGCTGAAACATATTCAAAGTCTAAACTTAAACGAAATAAGCCGTCTGTCAAAGATGTCCAGCCGGGGACGGGTTCGCGGGGAACCCTGAAGAGGAGTCCCACAGAGACAGCAGAGGCTGGGAGGGCAGCGTGGTGGACCAGCGAGCCGCTGCCGGCTGTGGAGAGTCTGTGGGCGTTGTGTGCTCTGCCGTGTCTGGAGAATCGGCACCGGGACCTGGTTCCTGATCTTCCACATCCATCTACAGCGAGACCCACAGCGCTGAGGTCCGGTGAACAGCGGTGGTGTGACCTCAGCGAAGACGTCGCTCCCTTCCCCGAACCCTCTCCACCCTCTCCGAGGACTCGCTCCAGTCCCAGCCCCTCCCCGCGGGAGCTCTCGGTGCAGACGCAGCCCGTCCCGGACCCGGCGGACAGACAGCTGTCGTCTCGCGGCAGCCAAAGGCCGCGGCCGTCCCTCCACGGCTGGGAGGGGCCGCCGTCGTCAGCCGGACCCTCGAGGGCGGGGGGGGGCGAGGGGAGGAGAGGACGGGAGACCGGACCGCTTCTCACGGGCCAGGCGAAAGTGTCTGACGGCCGAGTTCCTCTGCAGAGGAAGGGGGAGgatagagaggaagaggaggggcaGAGTCGTGtcggaggagatggaggagcagcaggaggggCGGGGCTTCAAAGCTGCCCCATGTGCCTGCTGGACTTCCCTGTTGGGTTCACCCAGATGGACTGTGACGGCCACCTGGCCCAGTGTCTGTCCGAGGTGAACGTGGACATGACCTGGTGAGGCCGACGGGACGCTGGCTGGCTGCTGTCCAGtctcaacggccgcaaacggagacctttggaaacacCGTCGCTGACGCCAACGTTTCGCCGCCTGATTGAGTCTCATCTGTCACGACTGTCTCGTTCTGGGAGACTGAACTACTGACGTTACcgtggcaactaccagcaacggGCTGCGTATacacgctgcctcctgtttacccCGGCATGCGCATGCCCACTAtacgagaatgttgatgagatattttggtttgggcgtgttagtttaaacggagATAAGTTCTAAGTAAAAAACACTTACACGGAGTttgcttttggctcaaaactctcacgcaaaaaccaaaatgtaacaatgtaaatgtagccttagtcatgcaacagaaaactctgaatGGACagatagctgtctggattta
>XR_005639221.1
CCACCTGACCCCAGGACGGTAGGTGGCGGTGGCGGTGGCGGTGCGGCAGCGACCCGCCAGCTGAACcgagacagagaagaagaaggaagttCCCGTTCGTCACACTAGCGCGAAATGTCGAAGATGCTGAAATCATGGCTGAAACATATTCAAAGTCTAAACTTAAACGAAATAAGCCGTCTGTCAAAGATGTCCAGCCGGGGACGGGTTCGCGGGGAACCCTGAAGAGGAGTCCCACAGAGACAGCAGAGGCTGGGAGGGCAGCGTGGTGGACCAGCGAGCCGCTGCCGGCTGTGGAGAGTCTGTGGGCGTTGTGTGCTCTGCCGTGTCTGGAGAATCGGCACCGGGACCTGGTTCCTGATCTTCCACATCCATCTACAGCGAGACCCACAGCGCTGAGGTCCGGTGAACAGCGGTGGTGTGACCTCAGCGAAGACGTCGCTCCCTTCCCCGAACCCTCTCCACCCTCTCCGAGGACTCGCTCCAGTCCCAGCCCCTCCCCGCGGGAGCTCTCGGTGCAGACGCAGCCCGTCCCGGACCCGGCGGACAGACAGCTGTCGTCTCGCGGCAGCCAAAGGCCGCGGCCGTCCCTCCACGGCTGGGAGGGGCCGCCGTCGTCAGCCGGACCCTCGAGGGCGGGGGGGGGCGAGGGGAGGAGAGGACGGGAGACCGGACCGCTTCTCACGGGCCAGGCGAAAGTGTCTGACGGCCGAGTTCCTCTGCAGAGGAAGGGGGAGgatagagaggaagaggaggggcaGAGTCGTGtcggaggagatggaggagcagcaggaggggCGGGGCTTCAAAGCTGCCCCATGTGCCTGCTGGACTTCCCTGTTGGGTTCACCCAGATGGACTGTGACGGCCACCTGGCCCAGTGTCTGTCCGAGGTGAACGTGGACATGACCTGGTGAGGCCGACGGGACGCTGGCTGGCTGCTGTCCAGGTGAAGCAgccacgcgcacacacacacgcacacacacacacacacacacacacacacacacacacacactccaggaTTGTATCGTATGAAGGAAACTCCCAGAGAGCAGCTCGCACACAGAACGCTCAGCTTTCACTGGCAGCTTACCCGGGCTGTGCACCGACAGAGAGGCTGCTGGACACGCTGGgcgtagtctcgcattgccagaccttcctccacagcgctgcggaggaaggtccatccacacaacattcctggataggagaaaaaaaaactggctcCTGGTTTATCTTTTAAACCAATGACAATTGCACGGGCAGCGCCGAGCGCACCGGACGCAGtctcaacggccgcaaacggagacctttggaaacacCGTCGCTGACGCCAACGTTTCGCCGCCTGATTGAGTCTCATCTGTCACGACTGTCTCGTTCTGGGAGACTGAACTACTGACGTTACcgtggcaactaccagcaacggGCTGCGTATacacgctgcctcctgtttacccCGGCATGCGCATGCCCACTAtacgagaatgttgatgagatattttggtttgggcgtgttagtttaaacggagATAAGTTCTAAGTAAAAAACACTTACACGGAGTttgcttttggctcaaaactctcacgcaaaaaccaaaatgtaacaatgtaaatgtagccttagtcatgcaacagaaaactctgaatGGACagatagctgtctggattta

Function

NR:

description
Fanconi anemia core complex-associated protein 20

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74238 True 2061 lncRNA 0.49 4 35882700 35898593
XM_039800692.1 False 1827 mRNA 0.58 4 35887101 35898736
XM_039800693.1 False 1117 mRNA 0.62 5 35874622 35898736
XM_039800694.1 False 1802 mRNA 0.54 5 35886240 35898736
XM_039800695.1 False 1335 mRNA 0.59 5 35887101 35898736
XR_005639221.1 False 1676 transcript 0.59 5 35887101 35898736

Neighbor

gene id symbol gene type direction distance location
flna LOC100702302 coding downstream 490393 35311194 ~ 35384229 (-)
emd NA coding downstream 570607 35298496 ~ 35304015 (-)
mrpl49 NA coding downstream 587412 35286360 ~ 35287210 (-)
las1l las1l,LOC103461358 coding downstream 605193 35266701 ~ 35269429 (-)
crebzf crebzf coding downstream 608549 35262964 ~ 35266073 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding upstream 354440 36253176 ~ 36270025 (-)
plch2a plch2,LOC106935153 coding upstream 374135 36272871 ~ 36447792 (-)
igf3 LOC108228312 coding upstream 682787 36581523 ~ 36588712 (-)
si:dkeyp-110g5.4 NA coding upstream 700837 36599573 ~ 36606768 (-)
lrif1 NA coding upstream 711401 36610137 ~ 36625969 (-)
G55578 NA non-coding downstream 48375 35825478 ~ 35826247 (-)
G55505 NA non-coding downstream 165161 35491103 ~ 35709461 (-)
G55564 NA non-coding downstream 182785 35683811 ~ 35691837 (-)
G55558 NA non-coding downstream 209224 35634696 ~ 35665398 (-)
G55511 NA non-coding downstream 240227 35485732 ~ 35634395 (-)
G55590 NA non-coding upstream 62194 35960930 ~ 36016130 (-)
G55599 NA non-coding upstream 184350 36083086 ~ 36083333 (-)
G55602 NA non-coding upstream 185781 36084517 ~ 36084866 (-)
G55658 NA non-coding upstream 612623 36511359 ~ 36511658 (-)
G55666 NA non-coding upstream 641798 36540534 ~ 36542635 (-)
G55492 NA other downstream 464856 35404604 ~ 35409766 (-)
LOC120559165 NA other downstream 596768 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 1583553 34236566 ~ 34291069 (-)
G55124 fam110a,LOC104960682 other downstream 1747127 34024018 ~ 34127495 (-)
G55131 NA other downstream 1781504 34087970 ~ 34093118 (-)
LOC120559361 NA other upstream 658794 36557530 ~ 36559959 (-)
G56160 NA other upstream 783163 36681899 ~ 36724209 (-)
LOC120559655 mtch1,LOC102799640 other upstream 824502 36723238 ~ 36744132 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other upstream 986067 36884803 ~ 36895540 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other upstream 1086149 36984885 ~ 37001151 (-)

Expression


Co-expression Network