G55664


Basic Information

Item Value
gene id G55664
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 36593238 ~ 36595825 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU74363
tatcgactcaatgtCGCTTTTGTAGTATCACGTTGTGCAATATCAATATCGAAAATGTAATATGCAATATTCCGgatattttgtgaaatgtgCATAGAGACAGCGAAAGAAACGAGAAGCGTGaggacagagcgagagagagagagagagagagagagagagacagagagtgcgAACTGCGAAGCGTGTGTTTAAataaacccttgtgttgtacGAAAACCTGCTGTTTTGATATTCTATTAATccatttttatgtgttttcATATAGGTTAAAGAACATCGGAATGAGTATCTATTGCAATATTCACGCTCAAtttcgcaatatcacatttagTCAAAAACTCCTTCCATGACGATTGAAATAATCTTTCTCTTCAGCTCGTATGcagccatcatcatcatcatcatcatcatcatcatcatcatcatcatcttctaaCAAGCCAGCCGTCAGTCACGCGTCACAAGCCCCGCACTCACTTTTTAATTGGCCAACGGCACCTTCGAATCGAATCATTCTCCGACGGCGGCAAAACAGGAGAACGATAACGTAATCCATAATACGATGATCAGAAAAAGTATCATTCAACAAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74363 True 594 lncRNA 0.40 2 36593238 36595825

Neighbor

gene id symbol gene type direction distance location
igf3 LOC108228312 coding downstream 4526 36581523 ~ 36588712 (-)
plch2a plch2,LOC106935153 coding downstream 145446 36272871 ~ 36447792 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding downstream 323213 36253176 ~ 36270025 (-)
flna LOC100702302 coding downstream 1209009 35311194 ~ 35384229 (-)
emd NA coding downstream 1289223 35298496 ~ 35304015 (-)
si:dkeyp-110g5.4 NA coding upstream 3748 36599573 ~ 36606768 (-)
lrif1 NA coding upstream 14312 36610137 ~ 36625969 (-)
stk35 LOC105921027,LOC108249422 coding upstream 184476 36780301 ~ 36804670 (-)
gmeb2 gmeb2,LOC102776727 coding upstream 255025 36850850 ~ 36866302 (-)
plod1a NA coding upstream 307252 36903077 ~ 36952279 (-)
G55670 NA non-coding downstream 41351 36544954 ~ 36551887 (-)
G55666 NA non-coding downstream 50603 36540534 ~ 36542635 (-)
G55658 NA non-coding downstream 81580 36511359 ~ 36511658 (-)
G55602 NA non-coding downstream 508372 36084517 ~ 36084866 (-)
G55599 NA non-coding downstream 509905 36083086 ~ 36083333 (-)
G56162 NA non-coding upstream 18752 36614577 ~ 36615851 (-)
G56167 NA non-coding upstream 62064 36657889 ~ 36699601 (-)
G56155 NA non-coding upstream 87815 36683640 ~ 36712643 (-)
G56190 NA non-coding upstream 156620 36752445 ~ 36752701 (-)
G56191 NA non-coding upstream 156932 36752757 ~ 36753054 (-)
LOC120559361 NA other downstream 33279 36557530 ~ 36559959 (-)
si:ch73-70k4.1 NA other downstream 694502 35874622 ~ 35898736 (-)
G55492 NA other downstream 1183472 35404604 ~ 35409766 (-)
LOC120559165 NA other downstream 1315384 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 2302169 34236566 ~ 34291069 (-)
G56160 NA other upstream 86074 36681899 ~ 36724209 (-)
LOC120559655 mtch1,LOC102799640 other upstream 127413 36723238 ~ 36744132 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other upstream 288978 36884803 ~ 36895540 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other upstream 389060 36984885 ~ 37001151 (-)
G56335 NA other upstream 776810 37372635 ~ 37373316 (-)

Expression


Co-expression Network