G55670


Basic Information

Item Value
gene id G55670
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 36544954 ~ 36551887 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU74371
CGTCGGGGTGAAGTTCAGGAACCACTTCAGGAGGATCTTCCAGGACCTGTGGTGTCTGGGGAAGAGCTACAGCGCCCTGCCGCTCGGTGAACGGATCCAGCAACAAAACGGCTCGTCTTTCATCATGTGAGGACACCTGGCAGGTTCATGTGTTGAATAGAAACTTCCGTCCTTGAACCAAATATCCAGAAACTTTCCTCGTAGACCCAAAGGTCCAGAAACTTCCCTCCTAGACCCAAAAATCTAGAAACTTTCCTCATAGACCCAAAGATCCTGAAAGTTCCCTCCTAGACCCAAAGATCCAGAAAGTTTCCTCCTACACCTAAAGATCCCATAAGCATGGGAAATGGGGGTGCTGCAGCACCCCCTGGTGGTGAAGCTTTAAAACTGCGACG

Function

GO:

id name namespace
GO:0044265 cellular macromolecule catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74371 True 395 lncRNA 0.50 2 36544954 36551887

Neighbor

gene id symbol gene type direction distance location
plch2a plch2,LOC106935153 coding downstream 97162 36272871 ~ 36447792 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding downstream 274929 36253176 ~ 36270025 (-)
flna LOC100702302 coding downstream 1160725 35311194 ~ 35384229 (-)
emd NA coding downstream 1240939 35298496 ~ 35304015 (-)
mrpl49 NA coding downstream 1257744 35286360 ~ 35287210 (-)
igf3 LOC108228312 coding upstream 29636 36581523 ~ 36588712 (-)
si:dkeyp-110g5.4 NA coding upstream 47686 36599573 ~ 36606768 (-)
lrif1 NA coding upstream 58250 36610137 ~ 36625969 (-)
stk35 LOC105921027,LOC108249422 coding upstream 228414 36780301 ~ 36804670 (-)
gmeb2 gmeb2,LOC102776727 coding upstream 298963 36850850 ~ 36866302 (-)
G55666 NA non-coding downstream 2319 36540534 ~ 36542635 (-)
G55658 NA non-coding downstream 33296 36511359 ~ 36511658 (-)
G55602 NA non-coding downstream 460088 36084517 ~ 36084866 (-)
G55599 NA non-coding downstream 461621 36083086 ~ 36083333 (-)
G55590 NA non-coding downstream 528824 35960930 ~ 36016130 (-)
G55664 NA non-coding upstream 41351 36593238 ~ 36595825 (-)
G55662 NA non-coding upstream 42338 36594225 ~ 36598272 (-)
G56162 NA non-coding upstream 62690 36614577 ~ 36615851 (-)
G56167 NA non-coding upstream 106002 36657889 ~ 36699601 (-)
G56155 NA non-coding upstream 131753 36683640 ~ 36712643 (-)
si:ch73-70k4.1 NA other downstream 646218 35874622 ~ 35898736 (-)
G55492 NA other downstream 1135188 35404604 ~ 35409766 (-)
LOC120559165 NA other downstream 1267100 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 2253885 34236566 ~ 34291069 (-)
G55131 NA other downstream 2451836 34087970 ~ 34093118 (-)
LOC120559361 NA other upstream 5643 36557530 ~ 36559959 (-)
G56160 NA other upstream 130012 36681899 ~ 36724209 (-)
LOC120559655 mtch1,LOC102799640 other upstream 171351 36723238 ~ 36744132 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other upstream 332916 36884803 ~ 36895540 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other upstream 432998 36984885 ~ 37001151 (-)

Expression


Co-expression Network