G56155


Basic Information

Item Value
gene id G56155
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 36683640 ~ 36712643 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75190
AAGTGCAGAGTAATTCATTGTCAAATAGCAGAAAACAATATAACAGCCACGCGCTACAAAGAGAACAGTGGTTTAAATAATGTACACCCACCTTCCCAACATCCCTCTCTTCTGACTCTCCGATCACGCGCGATACGTGACGACACGAGCAGAGCATACACACATCTCGTAGAAAACCAACATACGTAACGTTTGCATCGTTTTATCTTGAGCGtgaatctcacacacacaccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcacacacactcgcatATACACGAAAGTGGGCGCCTCACCAATAAAATAAGTAATTTCCATGTGCTCTATTGCTTTAAGCTGACCCACCTGCCGTAAAAACATGCAGAGCAAGGAGCAAgtgaccccccccacccccaccgaCACTGCGTGCTTTTCTAAAATTACAGCGTTACAATGTGCGGAGCTTCATCTACACACTAGTTTTCATATAACAGACTACAAGAAAAACCTTCAGACTCAACTGTTCGTATGGAAGCCCATTCctgccaaataaaaaaaaataaaaaaaaaaaagacgcaaATGAAAAATTCTAGTTTTTCCATTTAAGTCACACTCATAAAATACAGAACTAAATCGCAATCGAAATTTTATTAACTGCACAAAttagttcaaggtgttttcacggttgttgatttgtttttaactgttttatttttttaaagttcaataaatgcaacaactttccaaaagtcaacgagTACTGGTGTCAATCGTGATTTCTATATCGACCAAAAATAATTGcgatcatgatttttttttcttcatgatcGAGCAGCTTTGATCCAAATTCTGAGTCAAGATTATCATGAAAAACTCAGACTTGGTTAGATACAAAGTCCCGATTTCAACTCGAGAAGTCAAAGCTATAAACGTAATAATGCGACACAGTTTTGACAAAATCTAAAATGTATTATGTCAAAATGATAAAAGtccattttatgtttttttatttaaattgtctttttattaactttttgtGCTAATtctgacctttttttcttttttgcatctTTTATCTCCTCGTTTCGGGGGGGGGGAAATGGGCTTCCATAGTTTTACCTCATGTGCCAGGaaacaggtttaaaaaaaaaaaaaaaaaaaaggtccaggCTACATTCACACAAACAGCATTTTGGAATTATTGTGGCggcaaaaaaatacatttcgcCATAAAAACTTCATTgacattcattttaaatgacaGCATTTTGGATATTGTGTTCACTGGAAGATGTTTAGCCCTGTGCTTCTAAATTTAAAAAGTCAGTCCACGCTAAATCTTGTTCACACTCCTATCCGACGAGTTGAATGCTTTGACTTTGCATGTTGCCGTGAGTTCAGCTGTACACGAGTCACATAACGGGTCCGTTCTGATTCATATAAAACAGGCCGAGTGGGTCAAACTGCTTTTAACAGATGCTAAGTCGACCAGAATTGGGTTAGATTGAGAcgacatttaaaaatatattttgctacgtttccccctctcattccccctgctctggtgtttccccctctcattccccctgctctggtgtttccctctcattccccctgccccgcccctaaaccggagacatttggaaactctTCTGACCGGTTTTGGTTTGGAGTCTGCAGAGTTGTGTTTCcgtctcaacggccgcaaacggagacctttggctaCACCGACGACAACGTTTCTCCGCCTGACCGGGTCACGACGTCTCGTTCTGAGACTTCGCTACAACTACCAGCAACAGGCGGAGtctccacgctgcctcctgtttatgcccagtatacgagaatgttgttgagatattttggtttaaaaacggAGATtgagttcttctactggagctaaaatcACTCGTGTGCACAGAGATCGCTTTTGGATCAAAACTCAAaacgcttaaaaaccaaaaacgcttaaaaaccaaaacgtagcgatgAAGATGTAGCCGAAGGGTTGCATGGAAAACAAATGGAATTGTTTCATGATGATTTAGGCTTTCCCACCCTGGTGAGACTACAAATTGGAGTTTGCAACATGTTCATGACATTAAAACAGACTGCAAAAAAATTATGGACGGAGCTTCTGGGTCCGAGAAATGAAGCCGACgctgaagctccttaaagctgcgttctctctaacttccagcaggggggagactccttaaagctgcattctctctaacttccagcaggggggagactccttaaagctgcattctctctaacttccagcaggggggagactccttaaagctgcattctctctaacttccagcaggggggagacaccttaaagctgcattctctctaacttccagcaggggggagactccttaaagctgcgttctctctaacttccagcaggggggagactccttaaagctgcattctctctaacttccagcaggggggagactccttaaagctgcgttctctctaacttccagcaggggactTCACcagctccaaaaagaagtctgagaaaatgagcctacttctctcTTGATTTATTTCCTCACTAAATATTTTCATAATTAGTTTTTATggatcgctagtttcaagtcctcttcatgatgttcatttagtaaatgatggtcccatttattttacaacagatgataaagcaggggatgtttTAGGACCTGTCAGTCAGGACTttccctttccctccctccccagCTCCGCCCTCTCGCCAAAACtcgaggcttcaaaacggcaCAAACCAACGGGTAACGGCACGGATGCTACGTCCACTAATATTAAAGTCTGTGCATTACAACTTTAAAATTGTAACACAGGTGTACTTTTCCAGTccaattaaaaacacaaatgaatgAGCTGTAGGCTCGACCGTACAGGAGCCGGATCAAACATCACGTAAGGTGCTAAAGGCATTTTTGAACAAAAGTGGGTCATTGTGAAAATGTAACAAGACTGTTACTTTGTTCCACAAAATGCATCACTCATATATTCACACTTTCCAAcgagcaaaattacgaatctaTCAAACTATAATTGTAAGTAACAAGACGTGACGGGGAAGACGAGCAGAAACATTCAGCTCACAGTCTTTGGTTAAGGTCAGAAGAGAAGCAGCACTTTGTAGAGGCGCCTCATTGTGAGCTCTTGTGGGAAACAACgaaaaaaacatttggacaGAATCCCTGAAGAGCATCAAGTGACCACTTAATGCAATGTTTGAGTTGAGAAGTCAACATAAAAAAGGGGAACACGTGAAGTGGATGTCCTGGTTTTTCGGGAAGGAGAAGAGCCCTCGGTAGGTCCGACTGGTGCTGGTTTATAGAGCAGGAATGTAATGGATGCTGGTATCAGGAGTGAAGACATCGCACTGCATCCActggtggaaaaaaacaaaaacaaacaagcaagtGGAGAGAATCCCAATCACTTTAAATCCCAGTTCAGTCTTCACGTGTGCGCAGGAAAGTAGAGAGGTACCCTCAGAAGCATCAGATAAAAGTGAAGACCTGCAGAAATGAAGGCAGCGGTTCCTGGAAAAAGCAAACGGATGAAATTGAGCCCCTTTATCATTTGTCCCGTATCACTCGGGTAACGCAGTTCTCCTTTCAGAGCCGAGGTTCCTCAGACAacgcaggattttttttttttttttttggacgaCTCTTTCAGGTTTCATGGTGGTGTTGTCGGCTAAAAAGCGGGTCCGAGTGAAGCTCATCTCTTCCCTGACTTCATGTAGGACGGTATCGCTCCCCGAGCGGTCAGGCCCTCGAAGCGCTTGTAGGTGTAGTTGATGAAGACCCAGTCCTTGTTCTTCAGGTCGGCCTCGGTCTGGTTGG
>TU75191
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcttaaaaTCAGAGACTGTTGGAGCGCAGACTTCAAAAACTAGtctttatttaaatgattttccTGCTCAAGTCTCTCATTCTGCCAGTGTTACACAGAGCAGCAGCCAACATAGCTGTACAGCAATTCACACATTGGTACACACAtgtttaaaggcagggttggtaatgttaAAAAGCCGGAAAGATTTAaaaagtagcatctcctcgggGCTCCCTCTAACTCCTCCCCCCCCCGCCCTCGGGgctgcttcagagcagagcTGAGAGAGGAACgcagttttacttcctgtctcaTTCAACGGTAAGCAAACACCTAAAACTATCCTACCGAATGTTGAAAACAAACACGACTACGGTCAGACACTGGTGGATTGCTGCAAACtgaattataattttggcctGTTGTCCCACAGCGCAGGGAAACCTGACtgcctatattaataataccgtCCAAAACGGCAGACATTATGCCACTCAGAGACAGCTTCGATTTACCAGACCTATAGGATTCTATTTAACAGAACTAAATATTATTGTGGTGGTGTGGAGGGAGTGTGGGGTGGATGTGGTGGCTCAGGTGAGCAGGTAGGGAGGGACTGATTGCTACAGCTGCAGTGAGTTGTCTAATCATGCTCTCCCTTTAAAGCAGTAGTGAGCCGGAGCAAGCTCTTGATGGCCGACTGTGAGAGAGGAGACGTGGACACGGTGTGGTGGGCTGGACAGCGCAAGTTTTGCCCTCGCAGACCGAGAGCCTCGGGCCAAGTGGGAGCGAGGGAGCTCCAGACGGATTGTGGGACGATTCATTGCTGATGCGTACCTCAAATAAAGAGCTGTGGCAAATATTcctccctgtgtgtttgtggttcgCTGTGAACAGTGGTCTACAGCAGTGGTACTGCTACAATTATATcggtcggttcaatccccagaccggaCAGGATataatctgggtggggaaagtgaaagagcagcgcttgtcccctccctcattaccactgaggtgcccttgagcaaggcacttaacctcCAACCTGCTCCAGTGTGAGCTGCTCAGTGGctcagcagatcagactgtggttgtactggttgcagcttccaggtatgaatgtggaactgtgtgaatgggATCAGGGcgtgaaaaaaacaaccaatgAAACGCCTCCTTGCCCCtgcagtgattggtACAGCTACAGGCGACGGATGCTTGTCGttcctttttcagagcccagaagttatttattgctgccGTGGGTGtgaagaccatttcaaacaatgtattaaaaaaaagtgtataccGGAAATAGTTACCAAGCCTGCCTTTAAAACCAAAACTGATACGGGGCATAAAACACACAGTGCTACATTCACATCTTGTCCTATGGACTCCtttaactatatatatacacacgctGGGTCCCAcgctgacagctagtgtttctTTGCCTTGTCCTTTCTCGTCTTCTCTTGGTATTCGAGGATCTTTTTGTGAAATATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75190 True 3901 lncRNA 0.43 2 36708636 36712643
TU75191 False 1609 lncRNA 0.48 2 36683640 36685282

Neighbor

gene id symbol gene type direction distance location
lrif1 NA coding downstream 57671 36610137 ~ 36625969 (-)
si:dkeyp-110g5.4 NA coding downstream 76872 36599573 ~ 36606768 (-)
igf3 LOC108228312 coding downstream 94928 36581523 ~ 36588712 (-)
plch2a plch2,LOC106935153 coding downstream 235848 36272871 ~ 36447792 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding downstream 413615 36253176 ~ 36270025 (-)
stk35 LOC105921027,LOC108249422 coding upstream 67658 36780301 ~ 36804670 (-)
gmeb2 gmeb2,LOC102776727 coding upstream 138207 36850850 ~ 36866302 (-)
plod1a NA coding upstream 190434 36903077 ~ 36952279 (-)
LOC120559725 rpl22,LOC102779685,LOC106566811,LOC106572248,LOC100699599,LOC101484027,LOC102785448,LOC103376530,LOC102235575,LOC104936395 coding upstream 341144 37053787 ~ 37061695 (-)
tbc1d25 tbc1d25 coding upstream 443725 37156368 ~ 37172204 (-)
G56162 NA non-coding downstream 67789 36614577 ~ 36615851 (-)
G55662 NA non-coding downstream 85368 36594225 ~ 36598272 (-)
G55664 NA non-coding downstream 87815 36593238 ~ 36595825 (-)
G55670 NA non-coding downstream 131753 36544954 ~ 36551887 (-)
G55666 NA non-coding downstream 141005 36540534 ~ 36542635 (-)
G56190 NA non-coding upstream 39802 36752445 ~ 36752701 (-)
G56191 NA non-coding upstream 40114 36752757 ~ 36753054 (-)
G56195 NA non-coding upstream 43570 36756213 ~ 36756471 (-)
G56197 NA non-coding upstream 45312 36757955 ~ 36758651 (-)
G56215 NA non-coding upstream 84800 36797443 ~ 36798196 (-)
LOC120559361 NA other downstream 123681 36557530 ~ 36559959 (-)
si:ch73-70k4.1 NA other downstream 784904 35874622 ~ 35898736 (-)
G55492 NA other downstream 1273874 35404604 ~ 35409766 (-)
LOC120559165 NA other downstream 1405786 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 2392571 34236566 ~ 34291069 (-)
LOC120559655 mtch1,LOC102799640 other upstream 10595 36723238 ~ 36744132 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other upstream 172160 36884803 ~ 36895540 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other upstream 272242 36984885 ~ 37001151 (-)
G56335 NA other upstream 659992 37372635 ~ 37373316 (-)
G56376 NA other upstream 856417 37569060 ~ 37839849 (-)

Expression


Co-expression Network