phc2a (LOC103367632,LOC102778931,LOC100708466,LOC102197996)


Basic Information

Item Value
gene id phc2a
gene name LOC103367632,LOC102778931,LOC100708466,LOC102197996
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 36984885 ~ 37001151 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75311
CTTCATGTGAATCTGTCTGGCTTTCCCATTGAGGACACGCACCAAGTGGATTGTTGTGTCTGCTGTTTGAATAAGTAGAAAGCCGAAGTGAGGTTATGAATCAGTTGCTAACTTTGCGTATCCTCATGTAGAGAGGATCCGCGGCTTTTAGCTGCTTAAACATTTGTCGGTGTTAAAAGTGGCGGTGGCGGGCTGGCTCCTCGCCGTCTCGGCGGACGGAGTGTGAGGGGGCGGCCTGTGCTCCAGTCATGACCTCTGGCAATGGGAACAATAACAGCAACGGCAGCCAGCACAATGGAGAGAGTAAAGCAGCCCAGCCCGTAGTCACGTCCCACATCCTCACCCATCTGATAGAAGGCTTCGTCATCCAGGAGGGTGCCGAGCCGTTCCCTGTGGAACGTCCATCCTTCTCAATTGAGAGCCTAAGGAGACACACTGCAGACTCAAAGATGGACTGCTTCTCACCAAAGGAGGTAAAAGCCCAGCAGGAGCCCATGCTGACCTGTGAGCTGTGTGGCCGGGTGGATTTCGCCTACGTCTTCAAACGGTCCAAGAGGTTCTGTTCTACGGTGTGCGCCAAACGCTACAACGTGGGATGCACTAAGAGAATGGGTCTCTTCCCGAACCGCAAAACCACCCTGGAGAACATGAAGAAACAAAGACCGCTGAACGGAAACCACAAAAACGGCAGTT
>TU75312
CTTCATGTGAATCTGTCTGGCTTTCCCATTGAGGACACGCACCAAGTGGATTGTTGTGTCTGCTGTTTGAATAAGTAGAAAGCCGAAGTGAGGTTATGAATCAGTTGCTAACTTTGCGTATCCTCATGTAGAGAGGATCCGCGGCTTTTAGCTGCTTAAACATTTGTCGGTGTTAAAAGTGGCGGTGGCGGGCTGGCTCCTCGCCGTCTCGGCGGACGGAGTGTAAGTAAATGAAAGCGTTGTTTGGAGCCGTTGAacaaagagcttttcttccCTCTGCCATTGTTGCCGAGCGGAGCGCCTGGTTTCTGACTTATTCAGAGGTGGTTTCGGACTGTAAAAGTGAGGGGGCGGCCTGTGCTCCAGTCATGACCTCTGGCAATGGGAACAATAACAGCAACGGCAGCCAGCACAATGGAGAGAGTAAAGCAGCCCAGCCCGTAGTCACGTCCCACATCCTCACCCATCTGATAGAAGGCTTCGTCATCCAGGAGGGTGCCGAGCCGTTCCCTGTGGAACGTCCATCCTTCTCAATTGAGAGCCTAAGGAGACACACTGCAGACTCAAAGATGGACTGCTTCTCACCAAAGGAGGTAAAAGCCCAGCAGGAGCCCATGCTGACCTGTGAGCTGTGTGGCCGGGTGGATTTCGCCTACGTCTTCAAACGGTCCAAGAGGTTCTGTTCTACGGTGTGCGCCAAACGCTACAACGTGGGATGCACTAAGAGAATGGGTCTCTTCCCGAACCGCAAAACCACCCTGGAGAACATGAAGAAACAAAGACCGCTGAACGGAAACCACAAAAACGGCAGTT
>XM_039800467.1
CTGTCTGGCTTTCCCATTGAGGACACGCACCAAGTGGATTGTTGTGTCTGCTGTTTGAATAAGTAGAAAGCCGAAGTGAGGTTATGAATCAGTTGCTAACTTTGCGTATCCTCATGTAGAGAGGATCCGCGGCTTTTAGCTGCTTAAACATTTGTCGGTGTTAAAAGTGGCGGTGGCGGGCTGGCTCCTCGCCGTCTCGGCGGACGGAGTGTAAGTAAATGAAAGCGTTGTTTGGAGCCGTTGAacaaagagcttttcttccCTCTGCCATTGTTGCCGAGCGGAGCGCCTGGTTTCTGACTTATTCAGAGGTGGTTTCGGACTGTAAAAGTGAGGGGGCGGCCTGTGCTCCAGTCATGACCTCTGGCAATGGGAACAATAACAGCAACGGCAGCCAGCACAATGGAGAGAGTAAAGCAGCCCAGCCCGTAGTCACGTCCCACATCCTCACCCATCTGATAGAAGGCTTCGTCATCCAGGAGGGTGCCGAGCCGTTCCCTGTGGAACGTCCATCCTTCTCAATTGAGAGCCTAAGGAGACACACTGCAGACTCAAAGATGGACTGCTTCTCACCAAAGGAGGTAAAAGCCCAGCAGGAGCCCATGCTGACCTGTGAGCTGTGTGGCCGGGTGGATTTCGCCTACGTCTTCAAACGGTCCAAGAGGTTCTGTTCTACGGTGTGCGCCAAACGCTACAACGTGGGATGCACTAAGAGAATGGGTCTCTTCCCGAACCGCAAAACCACCCTGGAGAACATGAAGAAACAAAGACCGCTGAACGGAAACCACAAAAACGGCAGTTCGAAGTCAAAAAGAAGAAGCCTGCTGGTCTCCCCCCCGCCTTCCCCGCCTCCGTCCCCCCgcctccccccgcctcccccCGCCCACTCCGGGCGCGACGGAGAGTCCAGCCAGTGTTCGGACTTAGCTGGCTACAGGACGCCCCAGTCCCCCCTGTCAGCCACGCAGCCCCACAGCTTCCTGCCCAGCGACCCGGGCCAGTGGGACATTCAGGACGTCTACGAGTTCATCTCCCTTCTGCCAGGTTGTCTGGAGATCGCCGAGGAGTTCCGTTCTCAGGAGATCGACGGGCAggccctgctgctgctgaaggagGACCATCTCATGGGGACCATGAACATCAAACTGGGCCCTGCGCTCAAGATCTTTGCCCAGATTAGCACGCTCAAAGACTCGTAGCCAATCTCAGCCTTTACACacccattacacacacacacacacacacacacacatacacaaacacacacacacacacacacaca

Function

NR:

description
PREDICTED: polyhomeotic-like protein 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75311 False 693 TUCP 0.53 5 36988785 37001151
TU75312 False 813 TUCP 0.52 5 36988785 37001151
XM_039800467.1 True 1282 mRNA 0.56 7 36984885 37001139

Neighbor

gene id symbol gene type direction distance location
plod1a NA coding downstream 32606 36903077 ~ 36952279 (-)
gmeb2 gmeb2,LOC102776727 coding downstream 118583 36850850 ~ 36866302 (-)
stk35 LOC105921027,LOC108249422 coding downstream 180215 36780301 ~ 36804670 (-)
lrif1 NA coding downstream 358916 36610137 ~ 36625969 (-)
si:dkeyp-110g5.4 NA coding downstream 378117 36599573 ~ 36606768 (-)
LOC120559725 rpl22,LOC102779685,LOC106566811,LOC106572248,LOC100699599,LOC101484027,LOC102785448,LOC103376530,LOC102235575,LOC104936395 coding upstream 52636 37053787 ~ 37061695 (-)
tbc1d25 tbc1d25 coding upstream 155217 37156368 ~ 37172204 (-)
LOC120559612 LOC103363412,LOC108249421,LOC107391357 coding upstream 219383 37220534 ~ 37254041 (-)
mthfr mthfr coding upstream 296354 37297505 ~ 37329403 (-)
LOC120559054 NA coding upstream 1073266 38074417 ~ 38077028 (-)
G56245 NA non-coding downstream 4549 36975594 ~ 36980336 (-)
G56235 NA non-coding downstream 37963 36911088 ~ 36946922 (-)
G56213 NA non-coding downstream 105726 36870769 ~ 36879159 (-)
G56215 NA non-coding downstream 186689 36797443 ~ 36798196 (-)
G56197 NA non-coding downstream 226234 36757955 ~ 36758651 (-)
G56250 NA non-coding upstream 23783 37024934 ~ 37025355 (-)
G56265 NA non-coding upstream 65514 37066665 ~ 37118456 (-)
G56279 NA non-coding upstream 101585 37102736 ~ 37118149 (-)
G56291 NA non-coding upstream 144183 37145334 ~ 37147442 (-)
G56275 NA non-coding upstream 229303 37230454 ~ 37230861 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other downstream 89345 36884803 ~ 36895540 (-)
LOC120559655 mtch1,LOC102799640 other downstream 240753 36723238 ~ 36744132 (-)
G56160 NA other downstream 260676 36681899 ~ 36724209 (-)
LOC120559361 NA other downstream 424926 36557530 ~ 36559959 (-)
si:ch73-70k4.1 NA other downstream 1086149 35874622 ~ 35898736 (-)
G56335 NA other upstream 371484 37372635 ~ 37373316 (-)
G56376 NA other upstream 567909 37569060 ~ 37839849 (-)
LOC120559227 esd other upstream 881017 37882168 ~ 37900343 (-)
G56436 NA other upstream 925043 37926194 ~ 37940548 (-)
LOC120559229 NA other upstream 998851 38000002 ~ 38046669 (-)

Expression


Co-expression Network