LOC120559227 (esd)


Basic Information

Item Value
gene id LOC120559227
gene name esd
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 37882168 ~ 37900343 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75596
TAACTGACGTTGGACTTCTGGACTGCACACAAACCCGGCGCTGGGAAATTAGCAAGCCAGTTGAGCACGAAGTTTCAGCCAACACTGCGGTTTAATAAGGTCAGCATGGCTCTCACACAGGTCTCCTCCAACAAGTGCGCTGGCGGCTTCCAGAAGGTGTTCGAACACGAAAGCACTGAGCTCAGGTGTAAGATGAAGTTTGCGGTCTACCTGCCTCCCAAGGCCGAGACAGACAAATGTCCCGTCATGTACTGGCTCTCAGgtctgaCGTGTACGGAGCAGAACTTCATCACCAAAGCTGGCAGTCAGGTCCCAGCTGCAGAGCACGGCATCATCATCGTCGCTCCAGACACCAGCCCACgtatatgaacacacacacacacacacacacacacacacacacgcaaacgcacacacacagacagatgcagacacacacatagacacgcacacacatgcagacacacacacacacacacacacgcacacacacagacacacacacgcacacacacagacacacagacacacacacacacacacacagaca
>XM_039800787.1
GATGGTGGAGAGCAAGGCGTCCGTGACGTCACTGCGTTCACCCTGACGTAACTGACGTTGGACTTCTGGACTGCACACAAACCCGGCGCTGGGAAATTAGCAAGCCAGTTGAGCACGAAGTTTCAGCCAACACTGCGGTTTAATAAGGTCAGCATGGCTCTCACACAGGTCTCCTCCAACAAGTGCGCTGGCGGCTTCCAGAAGGTGTTCGAACACGAAAGCACTGAGCTCAGGTGTAAGATGAAGTTTGCGGTCTACCTGCCTCCCAAGGCCGAGACAGACAAATGTCCCGTCATGTACTGGCTCTCAGgtctgaCGTGTACGGAGCAGAACTTCATCACCAAAGCTGGCAGTCAGGTCCCAGCTGCAGAGCACGGCATCATCATCGTCGCTCCAGACACCAGCCCAC

Function

symbol description
esd Predicted to enable S-formylglutathione hydrolase activity. Predicted to act upstream of or within formaldehyde catabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in female organism; intestinal bulb; and liver. Orthologous to human ESD (esterase D).

NR:

description
S-formylglutathione hydrolase

GO:

id name namespace
GO:0046294 formaldehyde catabolic process biological_process
GO:0018738 S-formylglutathione hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75596 True 550 TUCP 0.53 5 37882168 37900295
XM_039800787.1 False 409 mRNA 0.56 4 37892685 37900343

Neighbor

gene id symbol gene type direction distance location
mthfr mthfr coding downstream 552765 37297505 ~ 37329403 (-)
LOC120559612 LOC103363412,LOC108249421,LOC107391357 coding downstream 628127 37220534 ~ 37254041 (-)
tbc1d25 tbc1d25 coding downstream 709964 37156368 ~ 37172204 (-)
LOC120559725 rpl22,LOC102779685,LOC106566811,LOC106572248,LOC100699599,LOC101484027,LOC102785448,LOC103376530,LOC102235575,LOC104936395 coding downstream 820473 37053787 ~ 37061695 (-)
plod1a NA coding downstream 929889 36903077 ~ 36952279 (-)
LOC120559054 NA coding upstream 174074 38074417 ~ 38077028 (-)
LOC120559055 NA coding upstream 179538 38079881 ~ 38082216 (-)
tfe3a NA coding upstream 183479 38083822 ~ 38118628 (-)
fgd1 fgd1,LOC103367265 coding upstream 232879 38133222 ~ 38188792 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding upstream 292917 38193260 ~ 38206091 (-)
G56428 NA non-coding downstream 2636 37878916 ~ 37879532 (-)
G56421 NA non-coding downstream 13575 37824265 ~ 37868593 (-)
G56422 NA non-coding downstream 14202 37863453 ~ 37867966 (-)
G56416 NA non-coding downstream 52615 37791554 ~ 37829553 (-)
G56391 NA non-coding downstream 145000 37700014 ~ 37737168 (-)
G56434 NA non-coding upstream 17195 37917538 ~ 37979495 (-)
G56435 NA non-coding upstream 17616 37917959 ~ 37921199 (-)
G56453 NA non-coding upstream 51877 37952220 ~ 37953077 (-)
G56468 NA non-coding upstream 126403 38026746 ~ 38056778 (-)
G56469 NA non-coding upstream 130655 38030998 ~ 38054663 (-)
G56376 NA other downstream 42319 37569060 ~ 37839849 (-)
G56335 NA other downstream 508852 37372635 ~ 37373316 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other downstream 881017 36984885 ~ 37001151 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other downstream 986628 36884803 ~ 36895540 (-)
LOC120559655 mtch1,LOC102799640 other downstream 1138036 36723238 ~ 36744132 (-)
G56436 NA other upstream 25851 37926194 ~ 37940548 (-)
LOC120559229 NA other upstream 99659 38000002 ~ 38046669 (-)
G56438 NA other upstream 172996 38073339 ~ 38169676 (-)
G56441 NA other upstream 239701 38140044 ~ 38167270 (-)
G56504 NA other upstream 355320 38255663 ~ 38378423 (-)

Expression


Co-expression Network