G56436


Basic Information

Item Value
gene id G56436
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 37926194 ~ 37940548 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75606
gtgtgtatttgtatgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgagtgtgtgtgtctctgtgtctgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcgg
>TU75608
gtgtgtatttgtatgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgagtgtgtgtgtctctgtgtctgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcgg
>TU75609
gtgtgtatttgtatgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgagtgtgtgtgtctctgtgtctgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcgg
>TU75610
gtgtgtatttgtatgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgagtgtgtgtgtctctgtgtctgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgagtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75606 True 359 lncRNA 0.50 3 37926194 37940548
TU75608 False 275 TUCP 0.49 2 37926194 37940548
TU75609 False 293 lncRNA 0.49 2 37926194 37940548
TU75610 False 283 lncRNA 0.49 2 37926543 37940548

Neighbor

gene id symbol gene type direction distance location
mthfr mthfr coding downstream 596791 37297505 ~ 37329403 (-)
LOC120559612 LOC103363412,LOC108249421,LOC107391357 coding downstream 672153 37220534 ~ 37254041 (-)
tbc1d25 tbc1d25 coding downstream 753990 37156368 ~ 37172204 (-)
LOC120559725 rpl22,LOC102779685,LOC106566811,LOC106572248,LOC100699599,LOC101484027,LOC102785448,LOC103376530,LOC102235575,LOC104936395 coding downstream 864499 37053787 ~ 37061695 (-)
plod1a NA coding downstream 973915 36903077 ~ 36952279 (-)
LOC120559054 NA coding upstream 133869 38074417 ~ 38077028 (-)
LOC120559055 NA coding upstream 139333 38079881 ~ 38082216 (-)
tfe3a NA coding upstream 143274 38083822 ~ 38118628 (-)
fgd1 fgd1,LOC103367265 coding upstream 192674 38133222 ~ 38188792 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding upstream 252712 38193260 ~ 38206091 (-)
G56435 NA non-coding downstream 4995 37917959 ~ 37921199 (-)
G56432 plxnb3 non-coding downstream 39179 37885795 ~ 37887015 (-)
G56431 NA non-coding downstream 43181 37882305 ~ 37883013 (-)
G56428 NA non-coding downstream 46662 37878916 ~ 37879532 (-)
G56421 NA non-coding downstream 57601 37824265 ~ 37868593 (-)
G56453 NA non-coding upstream 11672 37952220 ~ 37953077 (-)
G56468 NA non-coding upstream 86198 38026746 ~ 38056778 (-)
G56469 NA non-coding upstream 90450 38030998 ~ 38054663 (-)
LOC120559231 NA non-coding upstream 113027 38053575 ~ 38054241 (-)
G56475 NA non-coding upstream 119361 38059909 ~ 38063750 (-)
LOC120559227 esd other downstream 25851 37882168 ~ 37900343 (-)
G56376 NA other downstream 86345 37569060 ~ 37839849 (-)
G56335 NA other downstream 552878 37372635 ~ 37373316 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other downstream 925043 36984885 ~ 37001151 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other downstream 1030654 36884803 ~ 36895540 (-)
LOC120559229 NA other upstream 59454 38000002 ~ 38046669 (-)
G56438 NA other upstream 132791 38073339 ~ 38169676 (-)
G56441 NA other upstream 199496 38140044 ~ 38167270 (-)
G56504 NA other upstream 315115 38255663 ~ 38378423 (-)
G56539 NA other upstream 464712 38405260 ~ 38406187 (-)

Expression


Co-expression Network