G56469


Basic Information

Item Value
gene id G56469
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38030998 ~ 38054663 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75657
tcatggaaaaagcaaagaaataaAGATAAACAATAAGACAAATAGAGATTTACGAGAAAGCTTGCTAAACACCCTCTCTGGTTTACCCTACAAGTCCATCCATAAATTCCAATTGGTCCAAAACTCCGCTGCCCGTATTATCACCAGAACCCCAGCAACTGAACACATTGCTCCACTCCTCAAACAACTGCACTGGCTCCCTGTCCATTACCGTACTGACTTTAAGATTCTTCTTCTCACCTTCAAAGCCCTCCATAATCTCGGCTCTCCATACCTCTCTGAACTCCTTCAGCCCTACACTCCATCCCGAAACTCTccgatcctcctcttcctcactgctTTTCCCGCCTTCTGCCCGCCTGTCCACAATGGGGTTTAGAGCCTTTGGATCTCCCCACCTTTAAAAGCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75657 True 411 lncRNA 0.47 2 38030998 38054663

Neighbor

gene id symbol gene type direction distance location
mthfr mthfr coding downstream 701595 37297505 ~ 37329403 (-)
LOC120559612 LOC103363412,LOC108249421,LOC107391357 coding downstream 776957 37220534 ~ 37254041 (-)
tbc1d25 tbc1d25 coding downstream 858794 37156368 ~ 37172204 (-)
LOC120559725 rpl22,LOC102779685,LOC106566811,LOC106572248,LOC100699599,LOC101484027,LOC102785448,LOC103376530,LOC102235575,LOC104936395 coding downstream 969303 37053787 ~ 37061695 (-)
plod1a NA coding downstream 1078719 36903077 ~ 36952279 (-)
LOC120559054 NA coding upstream 19754 38074417 ~ 38077028 (-)
LOC120559055 NA coding upstream 25218 38079881 ~ 38082216 (-)
tfe3a NA coding upstream 29159 38083822 ~ 38118628 (-)
fgd1 fgd1,LOC103367265 coding upstream 78559 38133222 ~ 38188792 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding upstream 138597 38193260 ~ 38206091 (-)
G56434 NA non-coding downstream 51503 37917538 ~ 37979495 (-)
G56453 NA non-coding downstream 77921 37952220 ~ 37953077 (-)
G56435 NA non-coding downstream 109799 37917959 ~ 37921199 (-)
G56432 plxnb3 non-coding downstream 143983 37885795 ~ 37887015 (-)
G56431 NA non-coding downstream 147985 37882305 ~ 37883013 (-)
G56475 NA non-coding upstream 5246 38059909 ~ 38063750 (-)
G56479 NA non-coding upstream 11060 38065723 ~ 38068854 (-)
G56482 NA non-coding upstream 17952 38072615 ~ 38073220 (-)
G56487 NA non-coding upstream 111394 38166057 ~ 38166383 (-)
G56488 NA non-coding upstream 117129 38171792 ~ 38187904 (-)
G56436 NA other downstream 90450 37926194 ~ 37940548 (-)
LOC120559227 esd other downstream 130655 37882168 ~ 37900343 (-)
G56376 NA other downstream 191149 37569060 ~ 37839849 (-)
G56335 NA other downstream 657682 37372635 ~ 37373316 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other downstream 1029847 36984885 ~ 37001151 (-)
G56438 NA other upstream 18676 38073339 ~ 38169676 (-)
G56441 NA other upstream 85381 38140044 ~ 38167270 (-)
G56504 NA other upstream 201000 38255663 ~ 38378423 (-)
G56539 NA other upstream 350597 38405260 ~ 38406187 (-)
G56540 NA other upstream 364619 38419282 ~ 38513859 (-)

Expression


Co-expression Network