G56488


Basic Information

Item Value
gene id G56488
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38171792 ~ 38187904 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75682
tgtgtctgtgtgtgtgtgtgtgtatgtttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtctatctgtgtgtatgtgtgtctgtgtgtgtgtgtgtgtatgtgtgtatgtgtgtctgtgtgtgtgtgtgtgtctgtctatctgtgtgtatgtgtgtctgtgtgtgtgtgtgtgtgtgtatgtgtgtatgtgtgtctgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgg
>TU75683
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctatctgtgtgtgtgtgtgtgtgtctgtctatctgtgtgtatgtgtgtctgtgtgtgtgtgtgtgtatgtgtgtatgtgtgtctgtgtgtgtgtgtgtgtctgtctatctgtgtgtatgtgtgtctgtgtgtgtgtgtgtgtgtgtatgtgtgtatgtgtgtctgtgtgtgtgtgtgtgtatgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75682 True 343 lncRNA 0.47 2 38177375 38187770
TU75683 False 251 lncRNA 0.46 3 38171792 38187904

Neighbor

gene id symbol gene type direction distance location
tfe3a NA coding downstream 53164 38083822 ~ 38118628 (-)
LOC120559055 NA coding downstream 89576 38079881 ~ 38082216 (-)
LOC120559054 NA coding downstream 94764 38074417 ~ 38077028 (-)
mthfr mthfr coding downstream 842389 37297505 ~ 37329403 (-)
LOC120559612 LOC103363412,LOC108249421,LOC107391357 coding downstream 917751 37220534 ~ 37254041 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding upstream 5356 38193260 ~ 38206091 (-)
LOC120559058 NA coding upstream 141362 38329266 ~ 38336906 (-)
LOC120559059 LOC103370165 coding upstream 155583 38343487 ~ 38352553 (-)
pcsk1nl NA coding upstream 320588 38508492 ~ 38531063 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding upstream 350769 38538673 ~ 38567635 (-)
G56487 NA non-coding downstream 5409 38166057 ~ 38166383 (-)
G56482 NA non-coding downstream 98572 38072615 ~ 38073220 (-)
G56479 NA non-coding downstream 102938 38065723 ~ 38068854 (-)
G56475 NA non-coding downstream 108042 38059909 ~ 38063750 (-)
G56469 NA non-coding downstream 117129 38030998 ~ 38054663 (-)
G56495 NA non-coding upstream 5871 38193775 ~ 38484784 (-)
G56501 NA non-coding upstream 53828 38241732 ~ 38242674 (-)
G56510 NA non-coding upstream 82563 38270467 ~ 38333977 (-)
G56511 NA non-coding upstream 84599 38272503 ~ 38363799 (-)
G56513 NA non-coding upstream 87425 38275329 ~ 38275620 (-)
G56438 NA other downstream 2116 38073339 ~ 38169676 (-)
G56441 NA other downstream 4522 38140044 ~ 38167270 (-)
LOC120559229 NA other downstream 125123 38000002 ~ 38046669 (-)
G56436 NA other downstream 231244 37926194 ~ 37940548 (-)
LOC120559227 esd other downstream 271449 37882168 ~ 37900343 (-)
G56504 NA other upstream 67759 38255663 ~ 38378423 (-)
G56539 NA other upstream 217356 38405260 ~ 38406187 (-)
G56540 NA other upstream 231378 38419282 ~ 38513859 (-)
G56544 NA other upstream 241312 38429216 ~ 38500711 (-)
G56557 NA other upstream 289746 38477650 ~ 38479164 (-)

Expression


Co-expression Network