G56495


Basic Information

Item Value
gene id G56495
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38193775 ~ 38484784 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75691
gaaaataaaaaggaaacgcattgaagtagaaggtgtgtccaattttttggcctgtactgtatatcagaaATATTGGGATGTCGAAATAAGCGGCTAAAACTTTGGGAAAAGTGtcacaaatgttggaaaaaaagcaccaaaaacgccagcaaaagcaacaaaaaaaaaaaaaaaaaaaaaaaagctttaaaaatgtggaaaaaaagtgaccgaaacacaaaaaaaaagacaaaacatttttaaaaagcaacaaaaacgttgagaaagggacaacaaaaagtgttttgaggggaagacaacacaagggttaaccgtGTTATTCGGCAGAATCTCAACctgtggattcggtattcggccgaaccccaaaaatctggattcggtgcatccctaaaaacACACCTCAGACACCAACATCCACCCGCTGAGTTTTAATATTTCAGTTTGTTTGTCGTCGTTCGTGCAGCTCTAGAGATCAAAATGTTTCCGCGTGTTTAACTGCAGTTTACTGACAGGAAACTTAAACTCTTAGAgacatttcaaattaaaagcgcagtttcaaattaaaagcacacacctgaatataaaaaaaaaacctctcactttacagacacacacacacacacaactcttaTTTTCTTAATCCTATAATATTCCTCAGATGGGAAAATTCAAAACACACCTGAAGCGAGGAAACGTGTTTACACCGTCAGACTCTCAGACTCTCCACCTCCTtctgttaaaaagaaaacagtcaaaatttaattaaaaagtgcaGATTTTATGTAGACCGGGGTGACCCCAGCCCAACCTGCCGGCGGTTCGAttcctccctgcagctcaggctgggtaaacctgtacgtttatctgtCCTGTttccgttacaaatctgcggggaaccaatcacagactggcttatccacctggcgcgctattggccggtttaacacgatgacgatagagaagcgaccgagcagcttcttgtttacattcaacgtgGCGGCCACCGACCAGTCGATggcgctgtcgctgctacgtcccccagatcgttgctctgattggttgaagggcTATCCAATGGCGTGCAGAGGCATTTGAACTACGCCCGTTGATCCCGCCTcctagaaaatacagagcagactccccagactgatGTTCAGTCTTAAAAGATGGAGCATtagtctggtgatagccagttatttttgaaccaatcagaagcTCCTTTGAGTCTTTTTTTCGCTCCACAGAACGTGACGCGTTCACAAACCCTAAATAATCTCCTTATTAACTCGACTTTTGGTTTTGGACGtcttttcccaacatttttgtcactcatttcaacgttcttttatgattttcttttctccaaatgctatttaaatatatattaattgaataaaaacacccaaattcaatgaaagtagtgagctggttatttattttacttgtgaagagcgttgcatggaaccatccacggtactattttttaaaaatttggGTGAAAGAAACTTTCTGATCcaatttcagatatggaaactttttgaaaatgggtcagatttgacacAACCGGTTTGGTCGAACAAATCAACTTGTTCAgggatttttattattatttttttattacaaatgtattttaaatcatGAGCTGCGTTGGAAACCGTTCCCTCATCCACTCACTGGTCCCTCCATCAGGGGAGTTAGTCTCACTGCGGCCTCTCCTGCACGCCGGCTGCGTGGCgagtccgtttttattttgtctcccatggcaacaggttagagcttacacgcTTCCTGCCTGACGCACGTCTcagccgcgccgaaaacgcgtgcacgctagaaataggaccgatgcctatttttcacgcgacatgcaagcgtgttggaagcgtttccagacaacatagaacaggaaaagatgtttatatgtcgtttagacacgaatacgtattaataaatgacatgttgatgtttgaaagtctcgaggttttgacataaatgcagatatatataaatgtaatttaaaaaaataataataaataatgatagattttctaatatgtcacctgtcgatacagaaggaaatattctggagcctattttgccgtcaatactgccgatgttgtctttgctttaatcagatcagaatatatttatgtttatgtttatgggaaacatccatgtgtccagacgaggctagcagcagcagcagcagcagcgccgccagcgccgcgtcagacacctttctggcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75691 True 2247 lncRNA 0.41 2 38193775 38484784

Neighbor

gene id symbol gene type direction distance location
fgd1 fgd1,LOC103367265 coding downstream 4983 38133222 ~ 38188792 (-)
tfe3a NA coding downstream 75147 38083822 ~ 38118628 (-)
LOC120559055 NA coding downstream 111559 38079881 ~ 38082216 (-)
LOC120559054 NA coding downstream 116747 38074417 ~ 38077028 (-)
mthfr mthfr coding downstream 864372 37297505 ~ 37329403 (-)
pcsk1nl NA coding upstream 23708 38508492 ~ 38531063 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding upstream 53889 38538673 ~ 38567635 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding upstream 848478 39333262 ~ 39348187 (-)
gripap1 gripap1 coding upstream 1555201 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 1766772 40251556 ~ 40254265 (-)
G56488 NA non-coding downstream 5871 38171792 ~ 38187904 (-)
G56490 NA non-coding downstream 9542 38182837 ~ 38184233 (-)
G56487 NA non-coding downstream 27392 38166057 ~ 38166383 (-)
G56482 NA non-coding downstream 120555 38072615 ~ 38073220 (-)
G56479 NA non-coding downstream 124921 38065723 ~ 38068854 (-)
G56563 NA non-coding upstream 18819 38503603 ~ 38504288 (-)
G56493 NA non-coding upstream 49202 38533986 ~ 38534243 (-)
G56547 NA non-coding upstream 104589 38589373 ~ 38659203 (-)
G56575 NA non-coding upstream 118263 38603047 ~ 38604979 (-)
G56579 LOC101065103,LOC105912194,LOC105906823 non-coding upstream 137034 38621818 ~ 38623939 (-)
G56438 NA other downstream 24099 38073339 ~ 38169676 (-)
G56441 NA other downstream 26505 38140044 ~ 38167270 (-)
LOC120559229 NA other downstream 147106 38000002 ~ 38046669 (-)
G56436 NA other downstream 253227 37926194 ~ 37940548 (-)
LOC120559227 esd other downstream 293432 37882168 ~ 37900343 (-)
G56564 NA other upstream 46468 38531252 ~ 38531757 (-)
G56590 NA other upstream 157570 38642354 ~ 38645449 (-)
G56600 NA other upstream 310188 38794972 ~ 38805188 (-)
G56645 NA other upstream 417700 38902484 ~ 38902968 (-)
LOC120558769 NA other upstream 428936 38913720 ~ 38916360 (-)

Expression


Co-expression Network