G56516


Basic Information

Item Value
gene id G56516
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38303666 ~ 38307046 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75749
gggggaatgagaggggggaaacaccagagcagggggaatgagagggggaaccaccagagcagggggaatgagaggggggaaacaccagagcaggaggaatgagagggggaaacaccagagcagggggaatgagacgggggaaatgccagaacagggggaatgagagggggaaacgtagcaaaaagtagtttttttaaagtcaaaacGTAGCCTGAGAAGAACTTCTCCTTCGTGCTCTCAGATGTGAACTCACAGACTCAAAGTTGGATTTCTTGCTCACTGAATTTGAGTTGGTTTTGTTGCGACTCCACATGAAGCTGAACCCAGACCACCCTCAGGGGTTTAACTTCTGCAGAACGTCTTCCCTCACGTCACCAACATGGCCGACAGTAAAACCCCACCCCCACTCCAACCCCTCCCCTCGAGCTCTGCGTACGTGCGGCTCCGGTTCGAGGCCTGCAGGGTCTCCGAGCGACATGCAGGCGGTTGATTGTACAAACTAGAGGAGTGCAAACTGTTCCAGACAttcaacacaaagacacaataataataataataataataataataaaaaaaataatgagtcCATTTCCCCACTCTTTCATGAAGACtacaaactaaaaaataaagctactgtaaaaaaaaaaagaagtgggtTTGGTTTCGTATTAAAAGCGCTTCCTTTGGAAACAATCACAATACCAAAACAAACAGATTGGATGAAGACGAGTATGGAAGAACTCTAGACTCTGGCCTGGAAGAACAGCTCGTCCCGTCTGAAATACTTGAAAAACCGAATGAGGAGCGCTCAACGTTTTCTTATCAAACCGCTGACTCCGCTGTCGTTGAGAGCCAGGGTCTGTTAGAGGTTTCTGCtcgtttaaaggtcccatggcatgaaaatttcactttgaggttttttttaacattaatatgagttcccccagcctgcctatggtcccccagtggctagaaatggtgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatggaccaatcaggaatcttctccttatgaggtcataaggagcaaggttacctcccctttctctgctttgcccacccagagaatttggcccacccatgagagagagacatcatggctttcaaacaagcaaagtggcagttggtcaaggccaccccctccaccttgccccctctctcctcctcaatagctacagacacagaaatggcacatcctaaggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaatttcgggaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttctgatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagcatccaaaaagcagcatgtcatgggacctttaaaggacgTTTTTCCTCGCCGCTGTCTCTTgtggggaattgttgggtctctgtaaatagggctgcacaatatatcattTTCCATCATCATCACGATATCAACTCATCGCGAAAAGGCTGCGACACATTGCGGAAAGACCAAGATTTTTCACGTCTTAGTTGAGAGAAAaacatcagcagaaaactgcattttcactttttttcagcactgccttttatatttaattcattgttcaatttgttcaataaaagaaagttgaaaatgatttcctttcattagttttaaatccaacaagcagtttgttgtattttagcagaatacagAAAGCAGCTAGGCTGGCTATCGGCAGACCAAGCTCTATGTtttctgctctgtattttctacggcacaagaggcgtgatcaacgggcatagttcaaatgccTCTGTACGtgattggatagtccttcaaccaatcagagcaacgatctgggtgaccTAGCAACGACAGCGCCATCGACCGGGCTGCTACTCTTCGGTGGCCGCcacgttgaatgtaaacaagaagctgctcggtcgcttctctatcgtcatcgtgttaaaccggccaatagcgcgccaggtggataagccagtctgtgattggttccccgcagatttgtaacggaagcaggatagataaacgtacaggtttacccagcctgagctgcagggaggaaTCAAaccgccggcagatcgggctggggtTACCCAGACTAGAAAGcaactttaatatctgtttatttatcgcaaagtaatatcgttatcaaGATATTTTCCCCTCATaccgtgcagccctagtctagACCTGCaccatctgtaaagtgtcctaagataacttctgttattatTTGACACTTTGGATGAAATTGAACTGCTCCTCAAGTTGTTCAAATACTTCAAACGATATTAAAAAtgggctaaaaatagaaaaaaccTCGGTTCAGAATGAGGTCTGAGTTGAAGTCATGAATATAAATACTCATGCATCTGATTCGCTACCTGTAGGGGGGTCTGTGTGGAAGTggatggaaaacattacaggcCCTCTTGGTTTATTGGTGGGCTTAACGGAAAAATGGGGATGAGAAAACTAAACAATTGTGAGATTTCTAAGAAACCAGTTTAAGGTGCAAACCACCGCCCCACATCACCTCTGAGGCTTTCAGTCCTGGACTAGTGTCAGTCCAGGACTAGTGTCAGTCCTGGACTAGTTTCAGTGAGGGAGTGTCAGTCCAGAAAGAGGcaaagtcccgccccttccatTGGATCGCCATGgttttttttagtaaaaaatATCTATGGTAGTGAACGTGGAGTAGGATTTGGCATCGAGAAACTATTGGAAATATTGGAATTGTtttgaaaaagttggttttgaaTCTGATTCTCTGTTCCAAATTTTAAAGGCATACCATGTCGTTCCAATGAGACGACCTGTAGGGGGAGCCAAGCTGGAAAAGTTGCATAGTACgcctttaaaggtgctctaagcgatgttctTGTTGACGTTCTAAGTATTGTCAAACAGGACAGAGACCGcgatttttacagtgtgttcaggggacaggcagctagcagatagtgaggagatgttttttacagtgtgttcaggggacagacagctagcagatagtgaggagatgttttttacagtgtgttcagaggacaggcagctagcagatagtgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75749 True 3243 lncRNA 0.45 2 38303666 38307046

Neighbor

gene id symbol gene type direction distance location
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding downstream 97575 38193260 ~ 38206091 (-)
fgd1 fgd1,LOC103367265 coding downstream 114874 38133222 ~ 38188792 (-)
tfe3a NA coding downstream 185038 38083822 ~ 38118628 (-)
LOC120559055 NA coding downstream 221450 38079881 ~ 38082216 (-)
LOC120559054 NA coding downstream 226638 38074417 ~ 38077028 (-)
LOC120559058 NA coding upstream 22220 38329266 ~ 38336906 (-)
LOC120559059 LOC103370165 coding upstream 36441 38343487 ~ 38352553 (-)
pcsk1nl NA coding upstream 201446 38508492 ~ 38531063 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding upstream 231627 38538673 ~ 38567635 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding upstream 1026216 39333262 ~ 39348187 (-)
G56513 NA non-coding downstream 28046 38275329 ~ 38275620 (-)
G56501 NA non-coding downstream 60992 38241732 ~ 38242674 (-)
G56488 NA non-coding downstream 115762 38171792 ~ 38187904 (-)
G56490 NA non-coding downstream 119433 38182837 ~ 38184233 (-)
G56487 NA non-coding downstream 137283 38166057 ~ 38166383 (-)
LOC120558304 NA non-coding upstream 8234 38315280 ~ 38323039 (-)
G56509 NA non-coding upstream 20271 38327317 ~ 38328091 (-)
G56522 NA non-coding upstream 27328 38334374 ~ 38334803 (-)
G56524 NA non-coding upstream 30104 38337150 ~ 38393220 (-)
G56526 NA non-coding upstream 33253 38340299 ~ 38341070 (-)
G56438 NA other downstream 133990 38073339 ~ 38169676 (-)
G56441 NA other downstream 136396 38140044 ~ 38167270 (-)
LOC120559229 NA other downstream 256997 38000002 ~ 38046669 (-)
G56436 NA other downstream 363118 37926194 ~ 37940548 (-)
LOC120559227 esd other downstream 403323 37882168 ~ 37900343 (-)
G56539 NA other upstream 98214 38405260 ~ 38406187 (-)
G56540 NA other upstream 112236 38419282 ~ 38513859 (-)
G56544 NA other upstream 122170 38429216 ~ 38500711 (-)
G56557 NA other upstream 170604 38477650 ~ 38479164 (-)
G56564 NA other upstream 224206 38531252 ~ 38531757 (-)

Expression


Co-expression Network