Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120558304 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 38315280 ~ 38323039 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU75753 | True | 431 | lncRNA | 0.50 | 4 | 38315280 | 38323039 |
| XR_005639086.1 | False | 378 | lncRNA | 0.50 | 4 | 38315286 | 38322992 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120559803 | LOC102788279,LOC102300940,LOC107099231,LOC104961425 | coding | downstream | 109189 | 38193260 ~ 38206091 (-) |
| fgd1 | fgd1,LOC103367265 | coding | downstream | 126488 | 38133222 ~ 38188792 (-) |
| tfe3a | NA | coding | downstream | 196652 | 38083822 ~ 38118628 (-) |
| LOC120559055 | NA | coding | downstream | 233064 | 38079881 ~ 38082216 (-) |
| LOC120559054 | NA | coding | downstream | 238252 | 38074417 ~ 38077028 (-) |
| LOC120559058 | NA | coding | upstream | 6227 | 38329266 ~ 38336906 (-) |
| LOC120559059 | LOC103370165 | coding | upstream | 20448 | 38343487 ~ 38352553 (-) |
| pcsk1nl | NA | coding | upstream | 185453 | 38508492 ~ 38531063 (-) |
| LOC120558637 | syp,LOC103367257,LOC102314167,LOC102203308 | coding | upstream | 215634 | 38538673 ~ 38567635 (-) |
| LOC120558856 | slc6a8,LOC100704248,LOC102310663 | coding | upstream | 1010223 | 39333262 ~ 39348187 (-) |
| G56516 | NA | non-coding | downstream | 8234 | 38303666 ~ 38307046 (-) |
| G56513 | NA | non-coding | downstream | 39660 | 38275329 ~ 38275620 (-) |
| G56501 | NA | non-coding | downstream | 72606 | 38241732 ~ 38242674 (-) |
| G56488 | NA | non-coding | downstream | 127376 | 38171792 ~ 38187904 (-) |
| G56490 | NA | non-coding | downstream | 131047 | 38182837 ~ 38184233 (-) |
| G56509 | NA | non-coding | upstream | 4278 | 38327317 ~ 38328091 (-) |
| G56522 | NA | non-coding | upstream | 11335 | 38334374 ~ 38334803 (-) |
| G56524 | NA | non-coding | upstream | 14111 | 38337150 ~ 38393220 (-) |
| G56526 | NA | non-coding | upstream | 17260 | 38340299 ~ 38341070 (-) |
| G56528 | NA | non-coding | upstream | 32292 | 38355331 ~ 38357648 (-) |
| G56438 | NA | other | downstream | 145604 | 38073339 ~ 38169676 (-) |
| G56441 | NA | other | downstream | 148010 | 38140044 ~ 38167270 (-) |
| LOC120559229 | NA | other | downstream | 268611 | 38000002 ~ 38046669 (-) |
| G56436 | NA | other | downstream | 374732 | 37926194 ~ 37940548 (-) |
| LOC120559227 | esd | other | downstream | 414937 | 37882168 ~ 37900343 (-) |
| G56539 | NA | other | upstream | 82221 | 38405260 ~ 38406187 (-) |
| G56540 | NA | other | upstream | 96243 | 38419282 ~ 38513859 (-) |
| G56544 | NA | other | upstream | 106177 | 38429216 ~ 38500711 (-) |
| G56557 | NA | other | upstream | 154611 | 38477650 ~ 38479164 (-) |
| G56564 | NA | other | upstream | 208213 | 38531252 ~ 38531757 (-) |
