G56534


Basic Information

Item Value
gene id G56534
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38437766 ~ 38439311 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75777
TGTAGTGATAACACTGTGATATAAAATGAGATAATATAAGAACATATTGAAGTTTTAGCTGCATGTCGTGTGCGTATCATTCACACAAgtgttcaatattaaataaatacacaaccATATGAAGAAATACAGAAGAGATATAGATTTATATGCCAAGAAAATGCTATTATTGTCatccagggccagacatgtagagtttattaaCATGCGTTaatttaagacaaaagtaacatatctttgactgtattatagCATGTCTCATAAAGTCTTCtctcttacagtttggtccacataaagccccgAAAAAGTTAGGAAAATACGTCCTTAGCCATCATTGAGAAAAACGctgaaaaggctgaaaaaaatgacaaaaacattgtgaaaaaaaaaactttggaaaaagataTTGCTATCACCTGGTAGCAGACTATCACCTGGTAGCAGACTATCACCTGGTAGCAGACTATCACCAGGTAGCAGAGTATCACCAGGTAGCAGACTATCACCAGCCTGGAAACAGGCTGGTGATAGTCTGGTAGCAGACTATCACCAGGTTCCTCAGACATCtctgatggctgaggaactttttgctgattttttttggggctttatgttgaccaaactgtaagaGAGAAGACTATATCAggaagatatttgacttttctcttaaataaaagcatgttaataaactaaacatgtcaggcccctgatgtgattcttattttccagtcgAGTTTGACACTCCTGCTACGTGAGATATACAAAACAgtcaaaaatatttgacttttcgatgaaataaaagcatgtctaTAAACTCTGCATGTCTGGCCCTTAGAGAAGTTGAGTTAGACCCTCCTGATTTAAACCAAAGCAGAAAGACTTGATGATGAAACCGTAGTGTTGTGTTGAGTTTAGCTTCAGATTTGAGTTATATTGATTGATATTAATGTGCTGTAACAATGCATTTAGTCGTAAGGATCAAAAAAGTGCTTGCCTGTCGATCTGTCTGGAATAACCTGCAATgagctcttattgtgaaaggaTTAAACATGTATTGCACTATATAAACATCACATATTTTCTCtgtatttatttcataatgccgTATTGTTTTATAGATTATTGAACACTTGATTCTGCTGGACTGTAGTGGTTTACGTCTCCGACTGGGGGAGTTATGGGTAGTGTAGTTCTTCAGGAATAAAACAGTATAGAAACATTAAAGATGACTCTGATAATACTGATATCAACCGAGATACAGAGGGACAGACGGCTCTGTAATGTGCATGTTCtcagactgaaatattcaaacacatttcagacagaagagctctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctacctgtcctTGGCAGAGCGCAGGTCGGTTGTGATTGGGTCGTGCTGGATGGTCTGGTGCAGCATCAGAGCCAATAAACCGGCTCGATTCGTCATCGCTGTCCTCAAGTTCCTCTCCTGCTCAAACAGCTCGTCCAGCTTATaccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75777 True 1524 lncRNA 0.39 2 38437766 38439311

Neighbor

gene id symbol gene type direction distance location
LOC120559059 LOC103370165 coding downstream 85213 38343487 ~ 38352553 (-)
LOC120559058 NA coding downstream 100860 38329266 ~ 38336906 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding downstream 231675 38193260 ~ 38206091 (-)
fgd1 fgd1,LOC103367265 coding downstream 248974 38133222 ~ 38188792 (-)
tfe3a NA coding downstream 319138 38083822 ~ 38118628 (-)
pcsk1nl NA coding upstream 69181 38508492 ~ 38531063 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding upstream 99362 38538673 ~ 38567635 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding upstream 893951 39333262 ~ 39348187 (-)
gripap1 gripap1 coding upstream 1600674 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 1812245 40251556 ~ 40254265 (-)
G56541 LOC106536805,LOC103384381,LOC103130742 non-coding downstream 13984 38420981 ~ 38423782 (-)
G56512 NA non-coding downstream 41140 38276057 ~ 38396626 (-)
G56524 NA non-coding downstream 44546 38337150 ~ 38393220 (-)
G56511 NA non-coding downstream 73967 38272503 ~ 38363799 (-)
G56528 NA non-coding downstream 80118 38355331 ~ 38357648 (-)
G56559 NA non-coding upstream 40974 38480285 ~ 38481708 (-)
G56563 NA non-coding upstream 64292 38503603 ~ 38504288 (-)
G56493 NA non-coding upstream 94675 38533986 ~ 38534243 (-)
G56547 NA non-coding upstream 150062 38589373 ~ 38659203 (-)
G56575 NA non-coding upstream 163736 38603047 ~ 38604979 (-)
G56539 NA other downstream 31579 38405260 ~ 38406187 (-)
G56504 NA other downstream 59343 38255663 ~ 38378423 (-)
G56438 NA other downstream 268090 38073339 ~ 38169676 (-)
G56441 NA other downstream 270496 38140044 ~ 38167270 (-)
LOC120559229 NA other downstream 391097 38000002 ~ 38046669 (-)
G56557 NA other upstream 38339 38477650 ~ 38479164 (-)
G56564 NA other upstream 91941 38531252 ~ 38531757 (-)
G56590 NA other upstream 203043 38642354 ~ 38645449 (-)
G56600 NA other upstream 355661 38794972 ~ 38805188 (-)
G56645 NA other upstream 463173 38902484 ~ 38902968 (-)

Expression


Co-expression Network