LOC120558774


Basic Information

Item Value
gene id LOC120558774
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38955404 ~ 38957200 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75903
tgtgtgtgtgtgtgtgtatatatgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtcatgtctgtgtgtaacgtgtgtgtgtataatgtgtgtgtgtgtgtgtgtatatatgtgtgtgtgtgtctgtgtgtctgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtatatgtgtgtgtgtgtgtgtgtgtgtctgtataatgtgtgtgtgtgtgtgtatatgtgtgtgtgtgtgtgtctgtgtgtataatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataatgtgtgtgtgtgtgtgtgtgtataatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataatgtgtgtgtgtgtgtgtgtataatgtgtgtgtgtgtgtgtctgtgtgtataatgtgtgtgtgtgtgtgtgtgtataatgtgtgtgtgtgttttcagagtgTGTCTCAGAGAAGAGGAACTCTGTGTTTTAACTGTTTGACTGAAACAacgactctgtggaggagaaaCTCATCAGGAGAACCAGTCTGCAACGCCTGTGGCCtctactacacactacacaaggtcAACCGGCCGCTGGCGATGAAGAGAGACGGAATCCAAACCAGAAACCGTAAAGTGACCAATAAGAAGAAGAGGAGCAGGAAATCCGACCAATCAGAGACTAAGCTGTCCACACCGGTCCCCTTTCTGACCtctgcttcctcctcttcttcttcgtcttcaACCCTTGTGATGGCTCCCCGtcaaacatgaaaaaaacactttttgttgTCCATATCTCAacg
>XR_005639180.1
aatgtgtgtgtgtgtgtgtgtgtataatgtgtgtgtgtgttttcagagtgTGTCTCAGAGAAGAGGAACTCTGTGTTTTAACTGTTTGACTGAAACAacgactctgtggaggagaaaCTCATCAGGAGAACCAGTCTGCAACGCCTGTGGCCtctactacacactacacaaggtcAACCGGCCGCTGGCGATGAAGAGAGACGGAATCCAAACCAGAAACCGTAAAGTGACCAATAAGAAGAAGAGGAGCAGGAAATCCGACCAATCAGAGACTAAGCTGTCCACACCGGTCCCCTTTCTGACCtctgcttcctcctcttcttcttcgtcttcaACCCTTGTGATGGCTCCCCGtcaaacatgaaaaaaacactttttgttgTCCATATCTCAacgtttttgttactttttaaaaaaaaaaatattttttgtgcgttttggtcactttttcccacatttttatAGCTTTTTCTAATGGTTGTATccctttttgtcgcttttttgcaacatttttgacacttttcccAAAGTTTTAGGCGCTTATTTCGACGTCCCATATGTCTGATATAaaataaactttgaaaacgggtcagatttgacccaaagacaacatgagggttaataaACTTATAAATATATCTTCCTGTGaactgattttttttacttaaataaagttTTTGACTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75903 True 1022 TUCP 0.45 3 38955694 38957200
XR_005639180.1 False 686 lncRNA 0.39 2 38955404 38956414

Neighbor

gene id symbol gene type direction distance location
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 387769 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 424341 38508492 ~ 38531063 (-)
LOC120559059 LOC103370165 coding downstream 602851 38343487 ~ 38352553 (-)
LOC120559058 NA coding downstream 618498 38329266 ~ 38336906 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding downstream 749313 38193260 ~ 38206091 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding upstream 376062 39333262 ~ 39348187 (-)
gripap1 gripap1 coding upstream 1082785 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 1294356 40251556 ~ 40254265 (-)
LOC120559070 NA coding upstream 1578872 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 1623471 40580671 ~ 40594368 (-)
G56617 NA non-coding downstream 15875 38925950 ~ 38939529 (-)
G56647 NA non-coding downstream 46224 38908855 ~ 38909180 (-)
G56608 NA non-coding downstream 53495 38831139 ~ 38901909 (-)
G56611 NA non-coding downstream 55413 38822274 ~ 38899991 (-)
G56625 NA non-coding downstream 55653 38899523 ~ 38899751 (-)
G56660 NA non-coding upstream 42722 38999922 ~ 39000255 (-)
G56664 NA non-coding upstream 65712 39022912 ~ 39040238 (-)
G56665 NA non-coding upstream 69932 39027132 ~ 39067926 (-)
G56670 NA non-coding upstream 90948 39048148 ~ 39048870 (-)
G56666 NA non-coding upstream 111381 39068581 ~ 39091140 (-)
LOC120558769 NA other downstream 39044 38913720 ~ 38916360 (-)
G56645 NA other downstream 52436 38902484 ~ 38902968 (-)
G56600 NA other downstream 150216 38794972 ~ 38805188 (-)
G56590 NA other downstream 309955 38642354 ~ 38645449 (-)
G56564 NA other downstream 423647 38531252 ~ 38531757 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other upstream 156495 39113695 ~ 39202426 (-)
G56599 NA other upstream 280444 39237644 ~ 39242738 (-)
G56718 NA other upstream 432324 39389524 ~ 39513280 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other upstream 509026 39466226 ~ 39628477 (-)
G56721 NA other upstream 593298 39550498 ~ 39614237 (-)

Expression


Co-expression Network