Gene
RNA
| Item | Value |
|---|---|
| gene id | G56612 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 38690812 ~ 38693629 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005581 | collagen trimer | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU75905 | True | 430 | lncRNA | 0.50 | 3 | 38690812 | 38693629 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120558637 | syp,LOC103367257,LOC102314167,LOC102203308 | coding | downstream | 123177 | 38538673 ~ 38567635 (-) |
| pcsk1nl | NA | coding | downstream | 159749 | 38508492 ~ 38531063 (-) |
| LOC120559059 | LOC103370165 | coding | downstream | 338259 | 38343487 ~ 38352553 (-) |
| LOC120559058 | NA | coding | downstream | 353906 | 38329266 ~ 38336906 (-) |
| LOC120559803 | LOC102788279,LOC102300940,LOC107099231,LOC104961425 | coding | downstream | 484721 | 38193260 ~ 38206091 (-) |
| LOC120558856 | slc6a8,LOC100704248,LOC102310663 | coding | upstream | 639633 | 39333262 ~ 39348187 (-) |
| gripap1 | gripap1 | coding | upstream | 1346356 | 40039985 ~ 40132853 (-) |
| LOC120558739 | NA | coding | upstream | 1557927 | 40251556 ~ 40254265 (-) |
| LOC120559070 | NA | coding | upstream | 1842443 | 40536072 ~ 40566494 (-) |
| LOC120559367 | NA | coding | upstream | 1887042 | 40580671 ~ 40594368 (-) |
| G56631 | NA | non-coding | downstream | 17445 | 38673079 ~ 38673367 (-) |
| G56547 | NA | non-coding | downstream | 31609 | 38589373 ~ 38659203 (-) |
| G56626 | NA | non-coding | upstream | 100632 | 38794261 ~ 38856694 (-) |
| G56621 | NA | non-coding | upstream | 108935 | 38802564 ~ 38806909 (-) |
| G56605 | NA | non-coding | upstream | 113583 | 38807212 ~ 38812847 (-) |
| G56623 | NA | non-coding | upstream | 123986 | 38817615 ~ 38968057 (-) |
| G56611 | NA | non-coding | upstream | 128645 | 38822274 ~ 38899991 (-) |
| G56590 | NA | other | downstream | 45363 | 38642354 ~ 38645449 (-) |
| G56564 | NA | other | downstream | 159055 | 38531252 ~ 38531757 (-) |
| G56540 | NA | other | downstream | 176953 | 38419282 ~ 38513859 (-) |
| G56600 | NA | other | upstream | 101343 | 38794972 ~ 38805188 (-) |
| G56645 | NA | other | upstream | 208855 | 38902484 ~ 38902968 (-) |
| LOC120558769 | NA | other | upstream | 220091 | 38913720 ~ 38916360 (-) |
| LOC120558774 | NA | other | upstream | 261775 | 38955404 ~ 38957200 (-) |
| G56598 | pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 | other | upstream | 420066 | 39113695 ~ 39202426 (-) |
