G56613 (bcap31)



Basic Information


Item Value
gene id G56613
gene name bcap31
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39293636 ~ 39310030 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU75906
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgttaccagcAGTTTGCTGTGTTCCTCCAGCAGTCTGTCGTACTCAACCGTCAGATTCTCGCTCTGTTTCTTCATCGCACGGACGTCACTGTCCGACTTCTGCAGAGCTTTCTTGGTGGCGTCCAGCTTCTCCTTCAGGGTCTTCACCTCCTCTTTCAGAGTCTTGTTCTCCTCCTGCGGTCCGGCTCCCTTCTTCCCGGCCTCCGGCACCTCCACGCCAGCATCACGGAGTTTcTCTTGCAGCAGCTCGTTCTCATCCATGTATTTCTTGGCGGCGTTGCTGGCGCCCTCCGCCTGCTTCTTGAAGGCTTCGTTGGAGGCCATGAGCGAGGCCTGCTGGGAGAGCAGGGTGGCGAGGCGACGCAGCAACaggcAGAGCAGCAGAGCGAAGCCAGCGATGTACTCGTTCCTCTGAGCTCTGAACAGTTTCATGTGGATGTGTTCGATGGCCACCGGGTTGTTGGTCAGATCCACCTTCTCCGTCACGCTGTATTTCCTCACCTCACGGAAGG

Function


symbol description
bcap31 Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and protein localization to endoplasmic reticulum exit site. Predicted to act upstream of or within intracellular protein transport and vesicle-mediated transport. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in deafness, dystonia, and cerebral hypomyelination and sensorineural hearing loss. Orthologous to human BCAP31 (B cell receptor associated protein 31).

NR:

description
PREDICTED: B-cell receptor-associated protein 31

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU75906 True 681 lncRNA 0.55 4 39293636 39310030
Loading

Neighbor


gene id symbol gene type direction distance location
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 726001 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 762573 38508492 ~ 38531063 (-)
LOC120559059 LOC103370165 coding downstream 941083 38343487 ~ 38352553 (-)
LOC120559058 NA coding downstream 956730 38329266 ~ 38336906 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding downstream 1087545 38193260 ~ 38206091 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding upstream 23232 39333262 ~ 39348187 (-)
gripap1 gripap1 coding upstream 729955 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 941526 40251556 ~ 40254265 (-)
LOC120559070 NA coding upstream 1226042 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 1270641 40580671 ~ 40594368 (-)
G56707 NA non-coding downstream 5510 39282015 ~ 39288126 (-)
G56696 NA non-coding downstream 14539 39215260 ~ 39279097 (-)
G56606 NA non-coding downstream 42937 39096550 ~ 39250699 (-)
G56616 NA non-coding downstream 44834 39217008 ~ 39248802 (-)
G56684 NA non-coding downstream 172523 39118977 ~ 39121113 (-)
G56595 NA non-coding upstream 3195 39313225 ~ 39420011 (-)
G56597 NA non-coding upstream 11450 39321480 ~ 39323314 (-)
G56717 NA non-coding upstream 46104 39356134 ~ 39477920 (-)
G56722 NA non-coding upstream 121318 39431348 ~ 39431816 (-)
G56734 NA non-coding upstream 123206 39433236 ~ 39751148 (-)
G56599 NA other downstream 50898 39237644 ~ 39242738 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other downstream 91210 39113695 ~ 39202426 (-)
LOC120558774 NA other downstream 336436 38955404 ~ 38957200 (-)
LOC120558769 NA other downstream 377276 38913720 ~ 38916360 (-)
G56645 NA other downstream 390668 38902484 ~ 38902968 (-)
G56718 NA other upstream 79494 39389524 ~ 39513280 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other upstream 156196 39466226 ~ 39628477 (-)
G56721 NA other upstream 240468 39550498 ~ 39614237 (-)
LOC120559369 NA other upstream 1350779 40660809 ~ 40669343 (-)
G57041 NA other upstream 1524068 40834098 ~ 40903924 (-)

Expression


G56613(bcap31) Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G56613(bcap31) Expression in each Bioproject

Bar chart with 6 bars.
G56613(bcap31) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 14.
End of interactive chart.

Co-expression Network