G56642



Basic Information


Item Value
gene id G56642
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38874822 ~ 38899085 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU75936
ggtttcggctgaatcctgaaccccctggtagagatggtgctgactcctcctcccatcctcagtccatgaacccagtgaacacatgaatgaagtaaacagggactctccttcctttgctgtacctgaagttgctgcattctggctgctgtctggagattccttcgtgcacaactcgtattctttcagatgtttcagaccagatgttgtaacagcggccatgttgtgtatagtttagggtcctcgccaccaccagaccaatcagcattgaacagattgaacatgtagctggacttgaatggtcttcttttgactgaaagttctgccaaacaacaacttgttctgctcaccagatccatgtccacttcctcacagcctgctgcattgaacgctccacctacgtaaacaccttcctgtaatcaaCAGCGCCGTCACTatggcgaccagcgtagcgcgccgagtgcaagcgGAGGGTTCGGTTCCCTGGGAAAAAATTTctaaggttcagcagaaaccagaaccccgtcaaaaagcccaaatattcagc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU75936 True 544 lncRNA 0.49 2 38874822 38899085

Neighbor


gene id symbol gene type direction distance location
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 307187 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 343759 38508492 ~ 38531063 (-)
LOC120559059 LOC103370165 coding downstream 522269 38343487 ~ 38352553 (-)
LOC120559058 NA coding downstream 537916 38329266 ~ 38336906 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding downstream 668731 38193260 ~ 38206091 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding upstream 434177 39333262 ~ 39348187 (-)
gripap1 gripap1 coding upstream 1140900 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 1352471 40251556 ~ 40254265 (-)
LOC120559070 NA coding upstream 1636987 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 1681586 40580671 ~ 40594368 (-)
G56640 NA non-coding downstream 8577 38862989 ~ 38866245 (-)
G56626 NA non-coding downstream 18128 38794261 ~ 38856694 (-)
G56639 NA non-coding downstream 44382 38830085 ~ 38830440 (-)
G56638 NA non-coding downstream 46678 38827366 ~ 38828144 (-)
G56605 NA non-coding downstream 61975 38807212 ~ 38812847 (-)
G56625 NA non-coding upstream 438 38899523 ~ 38899751 (-)
G56647 NA non-coding upstream 9770 38908855 ~ 38909180 (-)
G56617 NA non-coding upstream 26865 38925950 ~ 38939529 (-)
G56660 NA non-coding upstream 100837 38999922 ~ 39000255 (-)
G56664 NA non-coding upstream 123827 39022912 ~ 39040238 (-)
G56600 NA other downstream 69634 38794972 ~ 38805188 (-)
G56590 NA other downstream 229373 38642354 ~ 38645449 (-)
G56564 NA other downstream 343065 38531252 ~ 38531757 (-)
G56544 NA other downstream 374111 38429216 ~ 38500711 (-)
G56645 NA other upstream 3399 38902484 ~ 38902968 (-)
LOC120558769 NA other upstream 14635 38913720 ~ 38916360 (-)
LOC120558774 NA other upstream 56319 38955404 ~ 38957200 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other upstream 214610 39113695 ~ 39202426 (-)
G56599 NA other upstream 338559 39237644 ~ 39242738 (-)

Expression



Co-expression Network