Gene
RNA
| Item | Value |
|---|---|
| gene id | G56647 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 38908855 ~ 38909180 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| 40S ribosomal protein S4, X isoform |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU75947 | True | 284 | lncRNA | 0.54 | 2 | 38908855 | 38909180 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120558637 | syp,LOC103367257,LOC102314167,LOC102203308 | coding | downstream | 341220 | 38538673 ~ 38567635 (-) |
| pcsk1nl | NA | coding | downstream | 377792 | 38508492 ~ 38531063 (-) |
| LOC120559059 | LOC103370165 | coding | downstream | 556302 | 38343487 ~ 38352553 (-) |
| LOC120559058 | NA | coding | downstream | 571949 | 38329266 ~ 38336906 (-) |
| LOC120559803 | LOC102788279,LOC102300940,LOC107099231,LOC104961425 | coding | downstream | 702764 | 38193260 ~ 38206091 (-) |
| LOC120558856 | slc6a8,LOC100704248,LOC102310663 | coding | upstream | 424082 | 39333262 ~ 39348187 (-) |
| gripap1 | gripap1 | coding | upstream | 1130805 | 40039985 ~ 40132853 (-) |
| LOC120558739 | NA | coding | upstream | 1342376 | 40251556 ~ 40254265 (-) |
| LOC120559070 | NA | coding | upstream | 1626892 | 40536072 ~ 40566494 (-) |
| LOC120559367 | NA | coding | upstream | 1671491 | 40580671 ~ 40594368 (-) |
| G56608 | NA | non-coding | downstream | 6946 | 38831139 ~ 38901909 (-) |
| G56611 | NA | non-coding | downstream | 8864 | 38822274 ~ 38899991 (-) |
| G56625 | NA | non-coding | downstream | 9104 | 38899523 ~ 38899751 (-) |
| G56642 | NA | non-coding | downstream | 9770 | 38874822 ~ 38899085 (-) |
| G56640 | NA | non-coding | downstream | 42610 | 38862989 ~ 38866245 (-) |
| G56617 | NA | non-coding | upstream | 16770 | 38925950 ~ 38939529 (-) |
| G56660 | NA | non-coding | upstream | 90742 | 38999922 ~ 39000255 (-) |
| G56664 | NA | non-coding | upstream | 113732 | 39022912 ~ 39040238 (-) |
| G56665 | NA | non-coding | upstream | 117952 | 39027132 ~ 39067926 (-) |
| G56670 | NA | non-coding | upstream | 138968 | 39048148 ~ 39048870 (-) |
| G56645 | NA | other | downstream | 5887 | 38902484 ~ 38902968 (-) |
| G56600 | NA | other | downstream | 103667 | 38794972 ~ 38805188 (-) |
| G56590 | NA | other | downstream | 263406 | 38642354 ~ 38645449 (-) |
| G56564 | NA | other | downstream | 377098 | 38531252 ~ 38531757 (-) |
| G56544 | NA | other | downstream | 408144 | 38429216 ~ 38500711 (-) |
| LOC120558769 | NA | other | upstream | 4540 | 38913720 ~ 38916360 (-) |
| LOC120558774 | NA | other | upstream | 46224 | 38955404 ~ 38957200 (-) |
| G56598 | pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 | other | upstream | 204515 | 39113695 ~ 39202426 (-) |
| G56599 | NA | other | upstream | 328464 | 39237644 ~ 39242738 (-) |
| G56718 | NA | other | upstream | 480344 | 39389524 ~ 39513280 (-) |
