G56666


Basic Information

Item Value
gene id G56666
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39068581 ~ 39091140 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU75971
acacacacacacacacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacagtcacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacagtcacacacacacacacacacacacacagtcacacacacacacaaacacacacacacacacacacacacacccacacacacacacacacacacgcacacac
>TU75972
acacacacacacacacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacagtcacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacagtcacacacacacacacacacacacacagtcacacacacacacaaacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacac
>TU75973
acacacacacacacacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacagtcacacagtcacacacacacacaaacacacacacacacacacacacacacccacacacacacacacacacacgcacacac
>TU75974
aaacacacagacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacagtcacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacagtcacacacacacacacacacacacacagtcacacacacacacaaacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacac
>TU75975
acacacacacacacacacacacacacacacacacacagtcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcacacacacacacacagtcacacacacacacacacacagtcacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU75971 True 430 lncRNA 0.50 2 39076327 39076790
TU75972 False 376 lncRNA 0.50 3 39068581 39076790
TU75973 False 208 lncRNA 0.50 2 39076327 39076790
TU75974 False 364 lncRNA 0.49 4 39068581 39091140
TU75975 False 214 lncRNA 0.50 2 39068581 39076790

Neighbor

gene id symbol gene type direction distance location
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 500946 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 537518 38508492 ~ 38531063 (-)
LOC120559059 LOC103370165 coding downstream 716028 38343487 ~ 38352553 (-)
LOC120559058 NA coding downstream 731675 38329266 ~ 38336906 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding downstream 862490 38193260 ~ 38206091 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding upstream 242122 39333262 ~ 39348187 (-)
gripap1 gripap1 coding upstream 948845 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 1160416 40251556 ~ 40254265 (-)
LOC120559070 NA coding upstream 1444932 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 1489531 40580671 ~ 40594368 (-)
G56665 NA non-coding downstream 655 39027132 ~ 39067926 (-)
G56670 NA non-coding downstream 19711 39048148 ~ 39048870 (-)
G56664 NA non-coding downstream 28343 39022912 ~ 39040238 (-)
G56660 NA non-coding downstream 68326 38999922 ~ 39000255 (-)
G56617 NA non-coding downstream 129052 38925950 ~ 38939529 (-)
G56606 NA non-coding upstream 5410 39096550 ~ 39250699 (-)
G56683 NA non-coding upstream 18964 39110104 ~ 39110675 (-)
G56684 NA non-coding upstream 27837 39118977 ~ 39121113 (-)
G56696 NA non-coding upstream 124120 39215260 ~ 39279097 (-)
G56616 NA non-coding upstream 125868 39217008 ~ 39248802 (-)
LOC120558774 NA other downstream 111381 38955404 ~ 38957200 (-)
LOC120558769 NA other downstream 152221 38913720 ~ 38916360 (-)
G56645 NA other downstream 165613 38902484 ~ 38902968 (-)
G56600 NA other downstream 263393 38794972 ~ 38805188 (-)
G56590 NA other downstream 423132 38642354 ~ 38645449 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other upstream 22555 39113695 ~ 39202426 (-)
G56599 NA other upstream 146504 39237644 ~ 39242738 (-)
G56718 NA other upstream 298384 39389524 ~ 39513280 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other upstream 375086 39466226 ~ 39628477 (-)
G56721 NA other upstream 459358 39550498 ~ 39614237 (-)

Expression


Co-expression Network