G56717


Basic Information

Item Value
gene id G56717
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39356134 ~ 39477920 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU76031
acacacacacacacacacacacacacacacacacacacacacacacagacagacagacacacagacacacacacagacacacacacacacacacagacacacacagacacagacacatacacacacacagacagtcacatagacacacacacacacacacacagacacacacacacagacacacacagacacagacacacacacacacacacacacacacagacacacacacagagacacacacacagacacacacagacacacacagacacacacagacacagacacacacacacacagacagtcacataacacacacacacacacacacacacagacacactcacacagacacacacacacagagacacagacacacacacacacacacaca
>TU76033
acacacacacacacacacacacacacacacacacacacacacacacagacagacagacagagacacacacacacacacacagagacacagacacacacacacagagacacacacacagagacacagacgcacacacacacacacacacagagacacacacacagagacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacagagacagagacacacacacacacagagacagagacacacacacacacacacacacacagagaacaacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacagacacacacacacacacagagagagagacacacacac
>TU76035
cacacacacacacacacacacagagacacacacacagagacacacacgcacacacagagacacacacacagagacacacacacagagacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacagagacagagacacacacacacacagagacacagacacacacagacacacacacacacacacacacacacacacacacacacagacacacacacacacacagagagagagacacacacac
>TU76036
cacacacacacatagacacagacacacacacacacagagacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacagagacagagacacacacacacacagagacacacacagacacacacacagacacacacagacacacacagacgcacacagaca
>TU76038
acacacacacacacacacaacacacacacacacacacacacacagacacacacacagagacacacacacagacacacacagacacacacagacacacacagacacagacacacacacacacagacacacacacagacacacacacagacacacacacgcacacagacacacacacacacacacacagagacacagacacacacacacagacacacacagagacagagacacacacacacacagagacacagacacacacagacagagacacaaacacacacagagagatagacacacacacacacacacacacacacagagacacagagagagagacacacacacacacacacacacacagagaacaacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacagacacacacacacacacagagagagagacacacacac
>TU76039
acacacacacacacacacaacacacacacacacacacacagacacacacagacacagacacacacacacacagacagtcacataacacacacacacacacacacacacagacacactcacacagacacacacacacagagacacagacacacacacacagagacacacacacagagacacagacgcacacacacacacacacacagagacacacacacagagacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacagagacagagacacacacacacacagagacacacacagacacacacacagacacacacagacacacacagacgcacacagaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76031 False 394 lncRNA 0.49 2 39392807 39419216
TU76033 False 406 lncRNA 0.50 3 39368304 39419216
TU76035 False 283 lncRNA 0.51 3 39368304 39393024
TU76036 False 184 lncRNA 0.50 3 39356134 39396390
TU76038 True 465 lncRNA 0.49 5 39368304 39477920
TU76039 False 381 lncRNA 0.50 5 39356134 39477920

Neighbor

gene id symbol gene type direction distance location
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding downstream 7947 39333262 ~ 39348187 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 788499 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 825071 38508492 ~ 38531063 (-)
LOC120559059 LOC103370165 coding downstream 1003581 38343487 ~ 38352553 (-)
LOC120559058 NA coding downstream 1019228 38329266 ~ 38336906 (-)
gripap1 gripap1 coding upstream 562065 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 773636 40251556 ~ 40254265 (-)
LOC120559070 NA coding upstream 1058152 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 1102751 40580671 ~ 40594368 (-)
LOC120559370 NA coding upstream 1120885 40598805 ~ 40602090 (-)
G56597 NA non-coding downstream 32820 39321480 ~ 39323314 (-)
G56613 bcap31 non-coding downstream 46104 39293636 ~ 39310030 (-)
G56709 NA non-coding downstream 47517 39308140 ~ 39308617 (-)
G56620 NA non-coding downstream 52236 39251592 ~ 39303898 (-)
G56707 NA non-coding downstream 68008 39282015 ~ 39288126 (-)
G56739 NA non-coding upstream 17354 39495274 ~ 39496157 (-)
G56741 NA non-coding upstream 37372 39515292 ~ 39516088 (-)
G56742 NA non-coding upstream 47450 39525370 ~ 39536821 (-)
G56724 NA non-coding upstream 83976 39561896 ~ 39571157 (-)
G56725 NA non-coding upstream 121470 39599390 ~ 39604614 (-)
G56599 NA other downstream 113396 39237644 ~ 39242738 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other downstream 153708 39113695 ~ 39202426 (-)
LOC120558774 NA other downstream 398934 38955404 ~ 38957200 (-)
LOC120558769 NA other downstream 439774 38913720 ~ 38916360 (-)
G56645 NA other downstream 453166 38902484 ~ 38902968 (-)
G56721 NA other upstream 72578 39550498 ~ 39614237 (-)
LOC120559369 NA other upstream 1182889 40660809 ~ 40669343 (-)
G57041 NA other upstream 1356178 40834098 ~ 40903924 (-)
G57036 NA other upstream 1399962 40877882 ~ 40884606 (-)
G57134 NA other upstream 1534153 41012073 ~ 41110667 (-)

Expression


Co-expression Network