G56718


Basic Information

Item Value
gene id G56718
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39389524 ~ 39513280 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU76053
TTAAacgctgtgtctctgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtgtgtgtctgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtctctgtctgtgtgtg
>TU76055
atacacacacatgcacgcacacacacacacacacacacagacacagctggGAGGAGGTAACCGAGACTGAAGAGACCGGTGGGATGGGCCGAGTTTAATTCCTGGAAAAGCAAACAAAATTGTTTTGATATCTCGTTTTGGCTGCAGTGTCCATCCATctgtccccacacacacacacacacacacacacacacacacacaacacacgcggCTCAGAGTCTTTAACGTTCTCCAGCAGTGAGATATTtattgatttctttcttttaatttattttctttacgaTGAGTTTAATTTATTGTTGGAGGATGAACACGGTTTCAGTAGTTTGTACAGTgttaaagagagagaagagctcacgcacacacacacgcacacacacacacgcacacacacacacacacacacacacacgttgtaaCGTGTGGAGACTGGGAAACGGCCGCTGACTCTTTCAAACATTAAAAATCTAAAAGTTTTGATTTCTACGGTGATTCGGCCACTTTCTACGTAAAGTCCGTTTTGCCCAAAACTCTTCGACATGGTCAGTGATTGGTGGAGTTGACTGACcccgcaccccccccccctttttctttAAGCCCCTCCCGGCCCTGCAGCCGACAGCCAATCCCAGCGGGCGTCATTGTATCATAGCAACGGCAGAACCACTGGACTCCCAGCGGGGCAGTCGGATGTCTTTATTGTAccataatataattataattattaataataataatctgagccggTGCTTCTCAGCCGCTGCGTTCAAATTAACTTTATCTTGCGAAGCACTTTTCTGAACGACAGATCCCGGTTTTTAAATAACGccaaactctctcacacacacacacacacacacacacacacacacacacacacacacacacacatctccgtTTGGGGTCCCGGTTCGGGTCCCCCAGCCAGCGGTTGGGAAGCACGGCTCACACTGGATCTCGTGTCTTAGTTCAGGACGGGATCGTCCACCGGTGGCGCCGCCACGGGCGTCGGATCGCAGCGCTTCAAGACGGATTTTAAACACATCCTCCGTTACATACGTCTGTTGGTTAGCTTGACGTTTCTATGACGACCGGGGTCGCACGCAGTCTGTGGACGCGGCAAttcaattttttctttttttttgtagattttCTGCAGATTTTTCATAAAATTTTCCGTAGAATTTTCTGCAGCTTttacacacttaaaaaaaagaaattaccaTAAAACTTGTTAACATATCTCCTTTCTAACAGAAGAAGGTAAGCAGTCTGCTGCATTtttgcagattttcattctggatcactgctttaaaaactgtaaaaaaaaaaaagaaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattataataacacAGCACTCAGACCCTTTTCAATCCACCAATGAAG
>TU76057
tgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctctgtgtctctgtgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctgtgtgtgcgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtcttgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgttgagGGTGTGTTGAGG
>TU76064
ctgtatgtgtgtgtctctatatgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtatgtgtgtgtgtgtgtgtctgtgtctctgtgtgtgtgtgtgtgtgtgtctgtgtgtgcgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtcttgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgcgtgtgtgtgtgtgctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtcgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgcgtgtgtgtctgtgtgtgtcgtcgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtaggtgtgtgggggtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76053 False 348 lncRNA 0.50 4 39417029 39513280
TU76055 True 1448 lncRNA 0.43 3 39455252 39477155
TU76057 False 314 lncRNA 0.51 3 39389524 39513124
TU76064 False 536 TUCP 0.51 3 39397765 39459874

Neighbor

gene id symbol gene type direction distance location
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding downstream 41337 39333262 ~ 39348187 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 821889 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 858461 38508492 ~ 38531063 (-)
LOC120559059 LOC103370165 coding downstream 1036971 38343487 ~ 38352553 (-)
LOC120559058 NA coding downstream 1052618 38329266 ~ 38336906 (-)
gripap1 gripap1 coding upstream 526705 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 738276 40251556 ~ 40254265 (-)
LOC120559070 NA coding upstream 1022792 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 1067391 40580671 ~ 40594368 (-)
LOC120559370 NA coding upstream 1085525 40598805 ~ 40602090 (-)
G56619 NA non-coding downstream 23230 39270259 ~ 39366294 (-)
G56597 NA non-coding downstream 66210 39321480 ~ 39323314 (-)
G56613 bcap31 non-coding downstream 79494 39293636 ~ 39310030 (-)
G56709 NA non-coding downstream 80907 39308140 ~ 39308617 (-)
G56620 NA non-coding downstream 85626 39251592 ~ 39303898 (-)
G56741 NA non-coding upstream 2012 39515292 ~ 39516088 (-)
G56742 NA non-coding upstream 12090 39525370 ~ 39536821 (-)
G56724 NA non-coding upstream 48616 39561896 ~ 39571157 (-)
G56725 NA non-coding upstream 86110 39599390 ~ 39604614 (-)
G56727 NA non-coding upstream 86598 39599878 ~ 39604156 (-)
G56599 NA other downstream 146786 39237644 ~ 39242738 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other downstream 187098 39113695 ~ 39202426 (-)
LOC120558774 NA other downstream 432324 38955404 ~ 38957200 (-)
LOC120558769 NA other downstream 473164 38913720 ~ 38916360 (-)
G56645 NA other downstream 486556 38902484 ~ 38902968 (-)
G56721 NA other upstream 37218 39550498 ~ 39614237 (-)
LOC120559369 NA other upstream 1147529 40660809 ~ 40669343 (-)
G57041 NA other upstream 1320818 40834098 ~ 40903924 (-)
G57036 NA other upstream 1364602 40877882 ~ 40884606 (-)
G57134 NA other upstream 1498793 41012073 ~ 41110667 (-)

Expression


Co-expression Network