G56734


Basic Information

Item Value
gene id G56734
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39433236 ~ 39751148 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU76084
acacacacacacacacacagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacagagacacacacacacagacacacacacacagacacacacagacacacacacacacagagacacacacagagacacacacagacacacacagagacacacacagagacacacacagacacacagagacacacacagacacagacagagacacacacagagacacacacacagacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76085
agacacacacacacacagagacacacacacacagagacacagacacacacagagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacagacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacagagacacacacacacacacaca
>TU76086
gagtgtgtctgtcaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacatacagacacacacacacacacacagagacacacacacacacacacacacacacacacagagacacacacacacagagacacacacacacacacacacacacacagagacacacacacacacagagagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacagacacagagagacacacacagagacacacacacacagacacacacacacagacacacacacacagagacacacacacagacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76087
cacacacacacacacacacagagacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacactcagagacacacacactcagagacacacacacacagacacacacacacagagacacacacacacacacacagagacacacacacacagagacacacacacacagacacacacacacagacacacacagacacacacacacacagagacacacacagagacacacacagacacacacagacacacacagagacacacacagagacacacacagacacacagagacacacacagacacagagacacacagacacacacacacatagacacacagacacacacagacacacacaga
>TU76090
acacacacacacacacacagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacagagacacacacacacagacacacacacacagacacacacagacacacacacacacagacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76091
gagtgtgtctgtcaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacatacagacacacacacacacacacagagacacacacacacacacacacacacacacacagagacacacacacacagagacacacacacacacacacacacacacagagacacacacacacacagagagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacagacacagacacacacacacagagacacacacagagacacacacacacagacacacacacacagacacacacagacacacacacacacagagacacacacagagacacacacagacacacacagacacacacacacacacagacacaaacacgcacagacacacacagacacacacgcacacagacacacacagacacaaacacgcacagagacacacacagagacacacacagacacacagagacacacacagacacagagacacacagacacacacacacatagacacacagacacacacagacacacacaga
>TU76092
acacacacacacacacacagacacacacacacagagacacacacacacagacacacacacacacacacacacacacacagagacacacacagagacacacacacacagacacacacacacagacacacacagacacacacacacacagagacacacacagagacacacacagacacacacagacacacacagagacacacacagagacacacacacagacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76093
cacacacacacacacacacagagacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacactcagagacacacacactcagagacacacacacacagacacacacacacagacacacacagacacacacacacacagagacacacacagagacacacacagacacacacagacacacacacacacacagacacaaacacgcacagacacacacagacacacacgcacacagacacacacagacacaaacacgcacagagacacacacagagacacacacagacacacagagacacacacagacacagagacacacagacacacacacacatagacacacagacacacacagacacacacaga
>TU76094
gagtgtgtctgtcaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacatacagacacacacacacacacacagagacacacacacacacacacacacacacacacagagacacacacacacagagacacacacacacacacacacacacacagagacacacacacacacagagagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacagacacagagacacacacacacacacacagagacacacacacacacagagacacacacacacacagaaacacacacacacacacacacac
>TU76095
catacacacacacacacacacagacacacacagacacacacacacacagagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacacacacagagacacacacacacacagagacacacacacacacagaaacacacacacacacacacacac
>TU76096
acagagacacacacagacacacacagagacacacacacacacagagacacaaacacacagacacacacacatacacagacacacacagacacacacagacacacacagagacacaaacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacagacacacacacacacagacacacacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>TU76097
agacagacacacacacagacacacacacacatacacacacacacagagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacagacacacacacacacagagacacacacacacacacacacacacacacacacacacacacacagagacacacacacacagagacacacacacacacacaca
>TU76098
acagagacacacacagacacacacagagacacacacacacacagagacacaaacacacagacacacacacatacacagacacacacagacacacacagacacacacagagacacaaacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacagacacacacacacacagacacacacacacacacagacacacacagacacaccacacacacacacacacacacacacacacatacacacacacagacacacacacacacatacacacacactcacacacatacacacacacaaatacaaatacagtcacacacacacccacatatacacacacatacacacacacactcacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76099
acacacacacacacacacacagagacacacagacacagagacacagagacacagacacacacacacacacacacagagacacacacacacacacacacacacagacacacacagagagacacacacagagacacacacacagacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76100
cacacacagagagagacacacacacacacacacacacacacagacacacacacacacacagacagacacacacacacagagagagacacacacacagacagagagagacacacacacacacacacacacacacacacacacacacacacacacacacagagagagacacacacacacacacacacacacacacacacacacacacacacacacacacagagagacacacacacacacacacacagacacacacacagacacacacagacacacacacagagacacacacacacacacagagacacacacacacacacacacagagacacacacacacagagacacacacacacacacagacacacacagagagacacacacagagacacacacacagacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76101
acacacacacacacacacagacacacacacacagagacacacacacacagacacacacacacacacacagagacacacacacacagacacacacacacagacacacacagacacacacacacacagagacacacacagagacacacacagacacacacagacacacacagagacacacacagagacacacacagacacacagagacacacacagacacagagacacacagacacacacacacatagacacacagacacacacagacacacacaga
>TU76102
agacacacacacacacagagacacacacacacagagacacagacacacacagagacacacacacacacagagacacagacacacacagagacacacacacacacacagagacacagacacacacagagacacacagagacacacacacacacacacacagagacacacacacacagagacacacacacacacacagacacacacagagagacacacacagagacacacacacagacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76103
agacacacacacacacagagacacacacacacagagacacagacacacacagacacacacacacagacacacacacacagacatacacacacacacacacacacagacagacatacacacacacacatacatacacacatacacacacacacacagagacacacacacacacacagagacacacacacacacacacacagagacacacacacacagagacacacacacacacacagacacacacagagagacacacacagagacacacacacagacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacagacacacacacacacacacacacacaccc
>TU76104
acacacacacacacacacagacacacacacacagagacacacacacacagacacacacacacacagacacacacacacagacacacacagacacacacacacacacagagacacacacagagacacacacacacagacacacacacagacacacacacacacacacagacacacg
>TU76105
agacacacacacacacagagacacacacacacagagacacagacacacacagagacacacacacacacagagacacagacacacacagacacacacagagacacacacacacacacagagacacacacacacacacacacagagacacacacacacagagacacacacacacagagacacacacacacagacacacacacacagagacacacacacacacacacagagacacacacacacagagacacacacacacagacacacacacacagacacacacagacacacacacacacagagacacacacagagacacacacagacacacacagacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacatacagacacacacacacacacacactcacacacacacagagacacacacacacacacacacacacagacatacagagacacacacacacacacacacacacagacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76084 False 340 lncRNA 0.50 4 39531151 39533594
TU76085 False 213 lncRNA 0.50 3 39532669 39564493
TU76086 False 520 lncRNA 0.50 3 39531151 39555997
TU76087 False 390 lncRNA 0.50 4 39531690 39580309
TU76090 False 212 lncRNA 0.50 3 39531151 39533594
TU76091 True 665 lncRNA 0.50 2 39531690 39555997
TU76092 False 308 lncRNA 0.50 3 39531151 39533594
TU76093 False 398 lncRNA 0.50 2 39531690 39580309
TU76094 False 440 lncRNA 0.50 2 39533449 39555997
TU76095 False 177 lncRNA 0.49 3 39533449 39568364
TU76096 False 303 lncRNA 0.49 2 39497489 39563825
TU76097 False 207 lncRNA 0.49 3 39532669 39751148
TU76098 False 445 lncRNA 0.47 3 39531151 39563825
TU76099 False 232 lncRNA 0.50 3 39531151 39564194
TU76100 False 487 lncRNA 0.50 5 39531151 39607051
TU76101 False 275 lncRNA 0.49 3 39531690 39533594
TU76102 False 324 lncRNA 0.50 3 39531151 39564493
TU76103 False 364 lncRNA 0.49 3 39531151 39564493
TU76104 False 175 lncRNA 0.50 3 39531464 39533594
TU76105 False 549 lncRNA 0.50 6 39433236 39564493

Neighbor

gene id symbol gene type direction distance location
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding downstream 85049 39333262 ~ 39348187 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 865601 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 902173 38508492 ~ 38531063 (-)
LOC120559059 LOC103370165 coding downstream 1080683 38343487 ~ 38352553 (-)
LOC120559058 NA coding downstream 1096330 38329266 ~ 38336906 (-)
gripap1 gripap1 coding upstream 288837 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 500408 40251556 ~ 40254265 (-)
LOC120559070 NA coding upstream 784924 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 829523 40580671 ~ 40594368 (-)
LOC120559370 NA coding upstream 847657 40598805 ~ 40602090 (-)
G56722 NA non-coding downstream 1420 39431348 ~ 39431816 (-)
G56595 NA non-coding downstream 13225 39313225 ~ 39420011 (-)
G56619 NA non-coding downstream 66942 39270259 ~ 39366294 (-)
G56784 NA non-coding upstream 100005 39851153 ~ 39859106 (-)
G56785 NA non-coding upstream 104056 39855204 ~ 39863677 (-)
G56809 NA non-coding upstream 275171 40026319 ~ 40026739 (-)
G57007 NA non-coding upstream 316194 40067342 ~ 40194898 (-)
G57011 NA non-coding upstream 379923 40131071 ~ 40228073 (-)
G56599 NA other downstream 190498 39237644 ~ 39242738 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other downstream 230810 39113695 ~ 39202426 (-)
LOC120558774 NA other downstream 476036 38955404 ~ 38957200 (-)
LOC120558769 NA other downstream 516876 38913720 ~ 38916360 (-)
G56645 NA other downstream 530268 38902484 ~ 38902968 (-)
LOC120559369 NA other upstream 909661 40660809 ~ 40669343 (-)
G57041 NA other upstream 1082950 40834098 ~ 40903924 (-)
G57036 NA other upstream 1126734 40877882 ~ 40884606 (-)
G57134 NA other upstream 1260925 41012073 ~ 41110667 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other upstream 1375187 41126335 ~ 41137726 (-)

Expression


Co-expression Network