G57034


Basic Information

Item Value
gene id G57034
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 41109710 ~ 41112961 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU76605
CGGTTCAGACGGGTTCTATGGCCTTCTTCACTTTGTCTGCTAAAAGTCAACAAAGGAGGGACTGAGGTCTTCTGGACAAGAAATAACTCCTATTAGACTCAAGGTTCACGAATTCAGCTACTTCACTTGGaaccttttgaatctacacatgaacacatttaataaataaataaaaagatggtTTCCATCAGAACTCTTACTACAGTACTTTGACACACTAGGACCTATcattttacaaactttaacCTCGGCCATAGGGAGGGGCACctttcatcaacaaaccaacactgcactAATTTCGGTCACCCTGTACGGTTGGAACTACGGATGAGGTAATCTACCGTCAGTAGGAGGACCGCTGTGTTGTCGTGCACTATcactgactccactgatgaacAGCCCCACGCTGGAGGAAGTCTCAAAACACGTTCCTTTACTGACCTAGAACTACACAACCAGAccttcagtagaccaaaactactcgctggtgttttcatctctaatgttaaatcactcaggtCATTACTCCTGTAAAGCCTCTATCAGACAGCAACAGTATCATCTGTTTGTGTAACCTAAATTTCCCCCTGCTGTAGAGCGCTCTTCTCAGAGgggagaagaagtcactctcagatgcaGAGGTTGGAGAGAGGGTAAGGAGCATCGTTGGTTTATCAGGTCACAaccgaacagagggaagaatcaTTGGTGTAACACGTTATGAAAGCATGAGCAGAGTGAGCTGGTACAGTAATAATGGTATCCTGGTTATCTCTGAAATGTCAGTAGGAAGGTGTACCAGAGGATGAGCCACTGAGCCACCCATTGGTTTTGTGGGTGTTCTGATGGGGTGATGACCCTGTTCTCTTGCCAGTCAAAGCTTCCATTTACTGGAAGTGACATGAGCTGGCTGGACAAACATGTGAATGATTAACCAGAGGGAAGAGATATTGTATTGTGGTGTATTGTAGTGAAGTTATCTGTAACAAttctaataaaaaagaaatgtattttggccctaaagcactcagtgctttataaatcaacagcagtattttaaaataacttatttcacaaaCGGGAAGCCAGATAAAACCTCTGAGAACTGCCACTTGATGAGGCAAAGGAGAGGGCTGCTGCAGTGCTTGGAGAGGGAGG

Function

GO:

id name namespace
GO:0009072 aromatic amino acid family metabolic process biological_process
GO:0044421 obsolete extracellular region part cellular_component
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU76605 True 1158 lncRNA 0.44 2 41109710 41112961

Neighbor

gene id symbol gene type direction distance location
itpr3 itpr3 coding downstream 84236 40845208 ~ 41025474 (-)
trnak-uuu_11 NA coding downstream 158115 40951523 ~ 40951595 (-)
trnak-uuu_10 NA coding downstream 161109 40948529 ~ 40948601 (-)
trnak-uuu_9 NA coding downstream 164183 40945455 ~ 40945527 (-)
trnak-uuu_8 NA coding downstream 168784 40940854 ~ 40940926 (-)
LOC120559074 NA coding upstream 52894 41165855 ~ 41199134 (-)
LOC120558615 NA coding upstream 183119 41296080 ~ 41707346 (-)
LOC120558619 NA coding upstream 272348 41385309 ~ 41387846 (-)
LOC120558620 NA coding upstream 301077 41414038 ~ 41414898 (-)
LOC120559078 NA coding upstream 375170 41488131 ~ 41496505 (-)
G57043 NA non-coding downstream 29006 41033491 ~ 41080704 (-)
G57144 NA non-coding downstream 37196 41071376 ~ 41072514 (-)
G57142 NA non-coding downstream 46038 41063011 ~ 41063672 (-)
LOC120559792 NA non-coding downstream 54825 41054105 ~ 41054885 (-)
G57029 NA non-coding downstream 130811 40969988 ~ 40978899 (-)
G57031 NA non-coding upstream 8310 41121271 ~ 41126279 (-)
G57149 NA non-coding upstream 42970 41155931 ~ 41159605 (-)
G57155 NA non-coding upstream 66462 41179423 ~ 41180486 (-)
G57169 NA non-coding upstream 267656 41380617 ~ 41381119 (-)
G57199 NA non-coding upstream 428376 41541337 ~ 41541555 (-)
G57041 NA other downstream 205786 40834098 ~ 40903924 (-)
G57036 NA other downstream 225104 40877882 ~ 40884606 (-)
LOC120559369 NA other downstream 440367 40660809 ~ 40669343 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other downstream 1481233 39466226 ~ 39628477 (-)
G56721 NA other downstream 1495473 39550498 ~ 39614237 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other upstream 13374 41126335 ~ 41137726 (-)
G57146 NA other upstream 17921 41130882 ~ 41131470 (-)
LOC120559079 NA other upstream 603909 41716870 ~ 41731801 (-)
LOC120558546 NA other upstream 791179 41904140 ~ 41918743 (-)
LOC120558559 NA other upstream 1015282 42128243 ~ 42134658 (-)

Expression


Co-expression Network