G57047


Basic Information

Item Value
gene id G57047
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40327980 ~ 40398216 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU76618
tgtgtctgtctttgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgtgtgtgtgtgtgtatgtgt

Function

GO:

id name namespace
GO:0099080 supramolecular complex cellular_component
GO:0099081 supramolecular polymer cellular_component
GO:0043292 contractile fiber cellular_component
GO:0044430 obsolete cytoskeletal part cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0015629 actin cytoskeleton cellular_component
GO:0099512 supramolecular fiber cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76618 True 115 lncRNA 0.49 2 40327980 40398216

Neighbor

gene id symbol gene type direction distance location
LOC120558739 NA coding downstream 73715 40251556 ~ 40254265 (-)
gripap1 gripap1 coding downstream 195127 40039985 ~ 40132853 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding downstream 979793 39333262 ~ 39348187 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 1760345 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 1796917 38508492 ~ 38531063 (-)
LOC120559070 NA coding upstream 137856 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 182455 40580671 ~ 40594368 (-)
LOC120559370 NA coding upstream 200589 40598805 ~ 40602090 (-)
LOC120559368 NA coding upstream 239475 40637691 ~ 40647772 (-)
LOC120559573 myh7b,LOC100707717 coding upstream 378818 40777034 ~ 40836209 (-)
G57012 NA non-coding downstream 42541 40204067 ~ 40285439 (-)
G57011 NA non-coding downstream 99907 40131071 ~ 40228073 (-)
G57007 NA non-coding downstream 133082 40067342 ~ 40194898 (-)
G57005 NA non-coding downstream 139634 40141227 ~ 40188346 (-)
G57013 NA non-coding downstream 142572 40133988 ~ 40185408 (-)
G57060 NA non-coding upstream 7732 40405948 ~ 40406213 (-)
LOC120559770 NA non-coding upstream 34805 40433021 ~ 40434879 (-)
G57073 NA non-coding upstream 94933 40493149 ~ 40546915 (-)
G57078 NA non-coding upstream 148585 40546801 ~ 40612347 (-)
G57110 NA non-coding upstream 319967 40718183 ~ 40794862 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other downstream 699503 39466226 ~ 39628477 (-)
G56721 NA other downstream 713743 39550498 ~ 39614237 (-)
G56718 NA other downstream 814700 39389524 ~ 39513280 (-)
G56599 NA other downstream 1085242 39237644 ~ 39242738 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other downstream 1125554 39113695 ~ 39202426 (-)
LOC120559369 NA other upstream 262593 40660809 ~ 40669343 (-)
G57041 NA other upstream 435882 40834098 ~ 40903924 (-)
G57036 NA other upstream 479666 40877882 ~ 40884606 (-)
G57134 NA other upstream 613857 41012073 ~ 41110667 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other upstream 728119 41126335 ~ 41137726 (-)

Expression


Co-expression Network