LOC120559369


Basic Information

Item Value
gene id LOC120559369
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40660809 ~ 40669343 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU76679
AGGGTCAAATGTGACTTTTGTCGTCATCAACACCCCTATCACATGGACTAAAGCCCAGAGCTACTGCAGAGCTCTCTACACAGACCTGCCCAGTGTGAGAAACATGACAGAGAACCAGAAGTTACTTGGGGTGATTGGAGTAAACTGGGTCTGGATCGGCCTTTTCAGAGACTCCTGGAAGTGGTCAGATGGAAGTACCTCCTCATTCAGCTTCTGGAAGAAAGGGCAACCTGATAACAACAACGGGAAAGAGACTTGTGTGGCTGCAGActtcagccaatcaggagcCTGGGAGGACTGGCCCTGTGACATGGAGAGAGCGTTCATTTGCTACGGTCCAGTGGTGTCAAAGAAAGTGATGAAAGTGAAGTTTGAGAACAAGAAGAATCTGGATCTGAATGACCCTGCTGTGATGGAGGCCATGTTGAAGCAGCTGAAACAGAAGCTGAGGGCCCAGGGGCTGGACGACAACATCAAGCTGAGCTGGAGGA
>XM_039801035.1
GAGAGTTATGCTTTAAGACATTTTGCCCGGCTGCTATTGGAAATAAGAATCTGTTCTTTATGACTTGCCTGAGTCAAGAAaggttaaatttaaataaaaaaaacaactatttgtTTATGGCTGTACGCCAACAAAATGGCATCAAACATGTTTTAGAAAAAGAGGAACCTTTTCTTTTGTCGATTGTGCCCGTTATTTGCCTAACATGTAAATAGTTGTTGCATGCTGCCAAACAATACGGAGGTGTTGTTCACTGTTCATGTGGAACGATGAGTTATATGAGCAGTGACCTGTCTGGAGTCACACAGTGAGGAGGACGGAGAGCAGACAAGATGGACAAACTGCTTCTGCTCATCATGGCTGCATCAGGAAGAACTTTACTGAAGCCCAAAGATACTGCAGAGAGAAAGACGCAGACCTGGCCACTGTAGACAGCATGGAGGTTATGAAGATCCTGAACAACACGGCAGATTTAGACAACATGTTCTACTCCAACAACAGCTACAGAGCCTGGATAGGACTGTACGATGACCATGTCTCCAACCCCTGGAGGTGGTCACTGTCAGACACAAGTTTCTACAAACCCGGGGAGACCGAGTTCAGACGATGGAGGGTTGGAGAACCAAACGTTGGATACAGTAACAACGCCTGCACAGTGATGGATCCTGATGGACTCTGGTACGACGAGAGTTGTGAACATGGGCTGTTTCCAGTCTGCGCTGATATCAGAGGGTCAAATGTGACTTTTGTCGTCATCAACACCCCTATCACATGGACTAAAGCCCAGAGCTACTGCAGAGCTCTCTACACAGACCTGCCCAGTGTGAGAAACATGACAGAGAACCAGAAGTTACTTGGGGTGATTGGAGTAAACTGGGTCTGGATCGGCCTTTTCAGAGACTCCTGGAAGTGGTCAGATGGAAGTACCTCCTCATTCAGCTTCTGGAAGAAAGGGCAACCTGATAACAACAACGGGAAAGAGACTTGTGTGGCTGCAGActtcagccaatcaggagcCTGGGAGGACTGGCCCTGTGACATGGAGAGAGCGTTCATTTGCTACGGTCCAGTGGTGTCAAAGAAAGTGATGAAAGTGAAGTTTGAGAACAAGAAGAATCTGGATCTGAATGACCCTGCTGTGATGGAGGCCATGTTGAAGCAGCTGAAACAGAAGCTGAGGGCCCAGGGGCTGGACGACAACATCAAGCTGAGCTGGAGGAAGCAGGCCGATGGAAAAGTCTTCCTCAAGGAAGACAAGAAGACcaacaagaggaggaggaagagggaggagctgtaatgttgagttgctgcgtctgttttcatcagagaaaaGTCTCTTTTTTGCAAGCAGAAATACTAAatatattcacagcttctagCTTCTCAAACATGCagatttaatactttttttgtcatatttggtgATAAACTCAATA

Function

GO:

id name namespace
GO:0043547 positive regulation of GTPase activity biological_process
GO:0044093 positive regulation of molecular function biological_process
GO:0043085 positive regulation of catalytic activity biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0051345 positive regulation of hydrolase activity biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76679 False 491 TUCP 0.50 3 40661025 40661886
XM_039801035.1 True 1436 mRNA 0.46 6 40660809 40669343

Neighbor

gene id symbol gene type direction distance location
LOC120559368 NA coding downstream 13037 40637691 ~ 40647772 (-)
LOC120559370 NA coding downstream 58719 40598805 ~ 40602090 (-)
LOC120559367 NA coding downstream 66441 40580671 ~ 40594368 (-)
LOC120559070 NA coding downstream 94315 40536072 ~ 40566494 (-)
LOC120558739 NA coding downstream 406544 40251556 ~ 40254265 (-)
LOC120559573 myh7b,LOC100707717 coding upstream 107691 40777034 ~ 40836209 (-)
itpr3 itpr3 coding upstream 175865 40845208 ~ 41025474 (-)
trnak-uuu_8 NA coding upstream 271511 40940854 ~ 40940926 (-)
trnak-uuu_9 NA coding upstream 276112 40945455 ~ 40945527 (-)
trnak-uuu_10 NA coding upstream 279186 40948529 ~ 40948601 (-)
G57078 NA non-coding downstream 48462 40546801 ~ 40612347 (-)
G57073 NA non-coding downstream 113894 40493149 ~ 40546915 (-)
G57032 NA non-coding downstream 201416 40386363 ~ 40459393 (-)
LOC120559770 NA non-coding downstream 225930 40433021 ~ 40434879 (-)
G57060 NA non-coding downstream 254596 40405948 ~ 40406213 (-)
G57110 NA non-coding upstream 48840 40718183 ~ 40794862 (-)
G57104 NA non-coding upstream 74621 40743964 ~ 40774662 (-)
G57114 NA non-coding upstream 83894 40753237 ~ 40771432 (-)
G57037 NA non-coding upstream 125316 40794659 ~ 40902820 (-)
G57121 NA non-coding upstream 134126 40803469 ~ 40803746 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other downstream 1032332 39466226 ~ 39628477 (-)
G56721 NA other downstream 1046572 39550498 ~ 39614237 (-)
G56718 NA other downstream 1147529 39389524 ~ 39513280 (-)
G56599 NA other downstream 1418071 39237644 ~ 39242738 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other downstream 1458383 39113695 ~ 39202426 (-)
G57041 NA other upstream 164755 40834098 ~ 40903924 (-)
G57036 NA other upstream 208539 40877882 ~ 40884606 (-)
G57134 NA other upstream 342730 41012073 ~ 41110667 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other upstream 456992 41126335 ~ 41137726 (-)
G57146 NA other upstream 461539 41130882 ~ 41131470 (-)

Expression


Co-expression Network