G57104


Basic Information

Item Value
gene id G57104
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40743964 ~ 40774662 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU76688
AAAAATCTTCTTTTGTTAATTTCTTGCCCCCCTATGGCTCCGGGCTCGCCTCCCctgattcttttatttttaatttttgtgtGGAAAGTTTCCTgattgttgctgaaatgtgcatGTTTCCTATAAGATATAGATGTTGGAACAAAGATGACAATAGTATTGTGCCCCTAGTGGTCAAAAAtcctacagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacccagacacacacacacacagacacataccgacacacacacacacacacacaaaccaacacacacccagacacacccacacacacacatgcacatatataaacacacacacacaaacacacacacacacacacacaaacacacacacacacacacaaggtggctgtactgtatgtgcgtgTTTTACTGTAGTCGATGTGTCTGACTGTAACCTTCAGTgtggtaaaataaataaaataaat
>TU76690
AAAAATCTTCTTTTGTTAATTTCTTGCCCCCCTATGGCTCCGGGCTCGCCTCCCctgattcttttatttttaatttttgtgtGGAAAGTTTCCTgattgttgctgaaatgtgcatGTTTCCTATAAGATATAGATGTTGGAACAAAGATGACAATAGTATTGTGCCCCTAGTGGTCAAAAAtcctacagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacccagacacacacacacacagacacataccgacacacacacacacacacacaaaccaacacacacccagacacacccacacacacacatgcacatatataaacacacacacacacacacacacacacacaacacacaca
>TU76691
AAAAATCTTCTTTTGTTAATTTCTTGCCCCCCTATGGCTCCGGGCTCGCCTCCCctgattcttttatttttaatttttgtgtGGAAAGTTTCCTgattgttgctgaaatgtgcatGTTTCCTATAAGATATAGATGTTGGAACAAAGATGACAATAGTATTGTGCCCCTAGTGGTCAAAAAtcctacagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacccagagacacacacacacacacacacacacacacacacacacacagacacacac

Function

NR:

description
PREDICTED: sodium/calcium exchanger 1-like isoform X1

GO:

id name namespace
GO:0015629 actin cytoskeleton cellular_component

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes

RNA

RNA id representative length rna type GC content exon number start site end site
TU76688 True 504 lncRNA 0.42 2 40774117 40774662
TU76690 False 402 lncRNA 0.44 3 40751144 40774662
TU76691 False 318 lncRNA 0.43 2 40743964 40774662

Neighbor

gene id symbol gene type direction distance location
LOC120559368 NA coding downstream 96192 40637691 ~ 40647772 (-)
LOC120559370 NA coding downstream 141874 40598805 ~ 40602090 (-)
LOC120559367 NA coding downstream 149596 40580671 ~ 40594368 (-)
LOC120559070 NA coding downstream 177470 40536072 ~ 40566494 (-)
LOC120558739 NA coding downstream 489699 40251556 ~ 40254265 (-)
LOC120559573 myh7b,LOC100707717 coding upstream 2372 40777034 ~ 40836209 (-)
itpr3 itpr3 coding upstream 70546 40845208 ~ 41025474 (-)
trnak-uuu_8 NA coding upstream 166192 40940854 ~ 40940926 (-)
trnak-uuu_9 NA coding upstream 170793 40945455 ~ 40945527 (-)
trnak-uuu_10 NA coding upstream 173867 40948529 ~ 40948601 (-)
G57078 NA non-coding downstream 131617 40546801 ~ 40612347 (-)
G57073 NA non-coding downstream 197049 40493149 ~ 40546915 (-)
G57032 NA non-coding downstream 284571 40386363 ~ 40459393 (-)
G57037 NA non-coding upstream 19997 40794659 ~ 40902820 (-)
G57121 NA non-coding upstream 28807 40803469 ~ 40803746 (-)
G57125 NA non-coding upstream 66383 40841045 ~ 40851279 (-)
G57127 cirbp non-coding upstream 113755 40888417 ~ 40889903 (-)
G57128 NA non-coding upstream 136626 40911288 ~ 40919326 (-)
LOC120559369 NA other downstream 74621 40660809 ~ 40669343 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other downstream 1115487 39466226 ~ 39628477 (-)
G56721 NA other downstream 1129727 39550498 ~ 39614237 (-)
G56718 NA other downstream 1230684 39389524 ~ 39513280 (-)
G56599 NA other downstream 1501226 39237644 ~ 39242738 (-)
G57041 NA other upstream 59436 40834098 ~ 40903924 (-)
G57036 NA other upstream 103220 40877882 ~ 40884606 (-)
G57134 NA other upstream 237411 41012073 ~ 41110667 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other upstream 351673 41126335 ~ 41137726 (-)
G57146 NA other upstream 356220 41130882 ~ 41131470 (-)

Expression


Co-expression Network