G57544


Basic Information

Item Value
gene id G57544
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 42170692 ~ 42175743 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU77336
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgggtaccagGATGTTCCATTAGTCAcaccttctttctcttctccgctgataaaacacatcagggaAAATACTGTTACATGTGTTggggaacagagctaagctagccaGTGAGCGAGGTaacgagagatgtagttcactgatgagagatgtagttcactgatgagagatgtagttcactgatgAGAGTTCTAGTTCACGGAGCGGTTTCACTCTAAACTACGTGGTGCTacgacaaactgagactttctccACTTcctaaattatcttttaaacagacaaacatcagatcactgtattttcttttccttccttgtATGAACAGCTCGACTGTTGCTGTGTGATCCAAACAGGCTGCTCACCAGCAAATTAACCAGAAAAACATTGAATTGGACTCATTCAATAGTTAGTGATGTGGATCAGTTTCAGAAATCAAACATGAATGCCTTAATGTTTTGTATTCGACTACTTGAGACTTTCTGTAGTTTTTCACTgattgtaaaatgtttttggcCTCAAAGCAGCTGATTTAGTGAGATGTCTTGTTTTTGTATTCATTGTTTTTGCACTCTGTCCTGCTGAATGTATTTATGTGTACAATGTTACCTCATTCATCTGTCTGTTATACATTTAGTTTGGGTTGCAGGATTATAAACTTTAAAAAGACACAGGAATATAATAGTTTCAGTATGAAATAATTGCTCTGGACTCACTCATTCATACAGAAGACAAATATAGAAATGTTCTTGTTACTTTGATGAAatttaatgtttcttttttggggA

Function

GO:

id name namespace
GO:0007267 cell-cell signaling biological_process
GO:0198738 cell-cell signaling by wnt biological_process
GO:1905114 cell surface receptor signaling pathway involved in cell-cell signaling biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0046930 pore complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77336 True 869 lncRNA 0.38 2 42170692 42175743

Neighbor

gene id symbol gene type direction distance location
LOC120558562 NA coding downstream 49221 42117744 ~ 42121471 (-)
LOC120558363 NA coding downstream 267924 41897815 ~ 41902768 (-)
LOC120558622 NA coding downstream 609057 41548861 ~ 41561635 (-)
LOC120558618 NA coding downstream 648403 41516985 ~ 41522289 (-)
LOC120559078 NA coding downstream 674187 41488131 ~ 41496505 (-)
LOC120559081 NA coding upstream 89783 42265526 ~ 42267943 (-)
LOC120558557 NA coding upstream 108893 42284636 ~ 42309616 (-)
LOC120559083 NA coding upstream 161750 42337493 ~ 42344971 (-)
LOC120558564 NA coding upstream 342041 42517784 ~ 42521088 (-)
edem2 edem2 coding upstream 551652 42727395 ~ 42740582 (-)
G57533 NA non-coding downstream 76915 42093445 ~ 42093777 (-)
G57271 NA non-coding downstream 397259 41621522 ~ 41773433 (-)
LOC120559836 NA non-coding downstream 412033 41757542 ~ 41758659 (-)
G57265 NA non-coding downstream 591776 41575016 ~ 41578916 (-)
G57199 NA non-coding downstream 629137 41541337 ~ 41541555 (-)
G57546 NA non-coding upstream 4440 42180183 ~ 42180507 (-)
G57543 NA non-coding upstream 5983 42181726 ~ 42182319 (-)
LOC120558571 NA non-coding upstream 21413 42197156 ~ 42235046 (-)
G57548 NA non-coding upstream 49623 42225366 ~ 42284125 (-)
LOC120558572 NA non-coding upstream 210456 42386199 ~ 42388387 (-)
LOC120558559 NA other downstream 36034 42128243 ~ 42134658 (-)
LOC120558546 NA other downstream 251949 41904140 ~ 41918743 (-)
LOC120559079 NA other downstream 438891 41716870 ~ 41731801 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other downstream 1032966 41126335 ~ 41137726 (-)
G57146 NA other downstream 1039222 41130882 ~ 41131470 (-)
G57595 NA other upstream 360479 42536222 ~ 42651415 (-)
G57599 NA other upstream 452013 42627756 ~ 42650751 (-)
LOC120559085 LOC106531971 other upstream 456474 42632217 ~ 42660186 (-)
LOC120558550 LOC101476713,LOC102213613,LOC102303270,LOC100708795,LOC107104441,LOC107391492,LOC103384463 other upstream 504575 42680318 ~ 42698353 (-)
LOC120559088 NA other upstream 933693 43109436 ~ 43123426 (-)

Expression


Co-expression Network