G57599


Basic Information

Item Value
gene id G57599
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 42627756 ~ 42650751 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU77410
atatattttctccatatcgcccagccctagcataGACTAAACAGCTGCTGCacgaaaaagtcaaagtaccgTTACCTGGGAACAGCGTGTAAAGTTTATTTTTAGCATCTCACATCATACTATCAGTCACtatatgaccactactactactactactactactactactactactaatactactgctgctactactactactactactactactactactactactactactactactacttctgcTACTACTCCTGCTACTACTACTCACTACTACGGTCACAAACGTGCCAAAATATGAATATCGCCGCTGTCAATGGGCTTATTTGCTAACGTCAGCTAGCTACCGACCGTTTTtcaaacagtaacgttaatacagcatttttaatctatcagctagcgttgctctgattggttggagcgctatcctattggtgcagagggaatttgaaagacaaccgtttatcccgcccctcggattgagccctgaccaatggggagttcccagacccaacatctggatgtgggtcagacccagacccaacatctggatgtgggtcagacccagacccaacatctggatgtgggtctggctggtcaggcTACAAAAATACATGATTGATATTGAAACATATGAAATCCACCCAGCTCCAGCCCATTGACTCTGGATGTGTGTGCAGGACCACCAAGCCAGCCGGCGGTTGGTTTCCTCCACAGACCAACGCCTCTTTGGGTTTTCCGTCCATGCCCAGAGCTAACGGTAACAGCTGACCGGTGTTTTAGAAATGGCGTCCCAAAGTTTTTGTTTTCGAACCTCACGATAATCCCGCCCCCTATCTGTATACTATCTCCAGACCAGCGCAGAGTTGGGGCCTGCTTTATTGGACCAGAACCAggtttattaaagaaaagaacCGGTTAGATATCTGGAACTGACTCCGAACCAGCACCAGAACTGCCGTGGTGGAAAAGACATGAGAGTGATGTGtctctgaagctacgatgtctgtgtttggtaccaggatgtaacgttactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgttcaCTACTGGACACATTTTTACTGAAATAAAGTCCCAGAGTGTAAACAGGAAGGGGCGGGGCTTATACACCGGAATAGGCGGGGCTTATACACAGGAAAGGGCGGGACTTCCCCTCTCCATAATGGACGGAGCATCATTGGTGTGTGGACGGCTGGAGTTTGGCGATATGTTCACCGTGATGGTTTGTTGAAACAGGGTGTGATGGTTTTTAACTCATTACCGTAACACAGGAGACTGATACCTACATACTGTAGACCTGGTCCTGTACTACAGACCAGCGTGGGCGGACTAGTCTGAGCCATCAGGCCGATCTATAACTGGTTAAATCTAACTGTTCAATGCaactttgttaaaaaataaggaaatgtttaaatgtttattttcatattcTGTCAAAGTTCAGAGGAAATCCTGAAGATGGTTTCAGGTCGCGGAGTtagactgactgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtctctgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctatgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctctgtgtctctgtgtgtgtctctgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagtatttaGCCAAAGATAATGTGTAAAACGGTTCGTGGACAATCTAGAACAACGATCACTGTACGATGTAAAACTATATTTTATAATCATATTAgttttttaaatactgtatcCTTTATTTTGCCTTGAGTAGATTATTTCTGCTATGCTAGCGTGTGTTAGTAAATGTTactgtccaatcagctgctgtaTTACTAGTCCAGACCTAGCATGCTAACTCCTGATTAGCAACGGTTGCTAAGTGTCAGAAGAGCTAAAGTCAATTATTTTTTCACAGactgggcttttattttgataaacaTATCTCAGAGGAAGATCTGCTGTAAAGCAGCTCACAGTGTGATTCATAAAGGGACAGGTCCGACCCACAGGAGGGTTTAATAActtagcgccccctagtggtgACAGGAAATacatcctcatatctaaaccagagaaca
>TU77412
gtgtgtgtgtgtgtgtatgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77410 True 2304 TUCP 0.45 3 42627756 42630685
TU77412 False 100 lncRNA 0.49 2 42628728 42650751

Neighbor

gene id symbol gene type direction distance location
LOC120558564 NA coding downstream 106668 42517784 ~ 42521088 (-)
LOC120559083 NA coding downstream 282785 42337493 ~ 42344971 (-)
LOC120558557 NA coding downstream 318140 42284636 ~ 42309616 (-)
LOC120559081 NA coding downstream 359813 42265526 ~ 42267943 (-)
LOC120558562 NA coding downstream 506285 42117744 ~ 42121471 (-)
edem2 edem2 coding upstream 76644 42727395 ~ 42740582 (-)
LOC120558553 NA coding upstream 122795 42773546 ~ 42950080 (-)
LOC120559086 NA coding upstream 314062 42964813 ~ 42987925 (-)
LOC120559087 NA coding upstream 368126 43018877 ~ 43038229 (-)
LOC120558554 NA coding upstream 403249 43054000 ~ 43098646 (-)
G57608 NA non-coding downstream 39217 42588075 ~ 42588539 (-)
LOC120558572 NA non-coding downstream 239369 42386199 ~ 42388387 (-)
G57548 NA non-coding downstream 343631 42225366 ~ 42284125 (-)
LOC120558571 NA non-coding downstream 392710 42197156 ~ 42235046 (-)
G57543 NA non-coding downstream 445437 42181726 ~ 42182319 (-)
G57602 NA non-coding upstream 22037 42672788 ~ 42679995 (-)
G57619 NA non-coding upstream 33399 42684150 ~ 42684861 (-)
G57618 NA non-coding upstream 47986 42698737 ~ 42701952 (-)
G57625 NA non-coding upstream 87981 42738732 ~ 42739396 (-)
G57624 NA non-coding upstream 113463 42764214 ~ 42766605 (-)
LOC120559080 NA other downstream 439301 42173990 ~ 42188455 (-)
LOC120558559 NA other downstream 493098 42128243 ~ 42134658 (-)
LOC120558546 NA other downstream 709013 41904140 ~ 41918743 (-)
LOC120559079 NA other downstream 895955 41716870 ~ 41731801 (-)
G57146 NA other downstream 1496286 41130882 ~ 41131470 (-)
LOC120558550 LOC101476713,LOC102213613,LOC102303270,LOC100708795,LOC107104441,LOC107391492,LOC103384463 other upstream 29567 42680318 ~ 42698353 (-)
LOC120559088 NA other upstream 458685 43109436 ~ 43123426 (-)
G57701 NA other upstream 540904 43191655 ~ 43192707 (-)
LOC120559834 NA other upstream 586965 43237716 ~ 43260860 (-)
G57908 NA other upstream 1197553 43848304 ~ 43884435 (-)

Expression


Co-expression Network