si:dkeyp-110g5.4


Basic Information

Item Value
gene id si:dkeyp-110g5.4
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 36599573 ~ 36606768 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799296.1
gcttttattttgaagggtgCGGCCCGGAAATCCTGTTGTTTTTGCGATGAAGTGATAACACAACACAAGTCGGATTCTTTAAAGCTGGATACGTACGTTTCATCAAGGAAATACACAGAGCATGGATCTCcttggaaaagtggaaatctACATCCCAGTGGACGCTGAGGTGAAAATATTCCCTATGTGGAGTTTACCTAAATCGGTGCTTAAACGAATTGGCCTCCCCCTGTCTGACTCTGAGGGCTCCGGGACGCTCGCAAACTCTCCAGAAGGCATATGTATTTGTCCAGCAATCATACGGAGGAAAGGCCAGAAACTTGTCTCCCACACAGGAAACGGTGGGACAGAAAACACATCGCTGCTGCACACAGAGTTTCGGTCCGGACAGATGTCCTTTGTCTGCCCCAACCGCACAGCTTACAAGGTGCTAAAGGACACCGTGCCTGGGAAAAAGGTCTCTGCGCACACATCTCACACCTCCCAGTTACCTCAGGGCTCTGCGCCGGATAAGTACAAAGATGCCGTCGTCATCTACCATGGACATGTTTACCTGTCCACCAGGAGGTCCAATCACAGCCGGAGTCAACGAGGGACACGTCAACCAAAGCCATCTTCCCACTCCGCCATTCCTAAAAGTTTAAAGAAGCGGCGGTCTCCCCAGGCTCGCCATGATCCTGCAGACAAAGAACTACGAAGGAAGAAATTGCGTGTCACTTTGCCCCAAACCTCCATAAAACCGCTACAGGATCTTCTCACCAAAACAGATAATAACTCCACCACGGACCAGGAGCTGCTACATGACAACATGCCCGAAAAAAACCCCACCGCTTGCAAAGTAACACACGGTGAACACGAGAAGGATGTTTTTACGCACAAGACCGTTGACGTGTCGTCATCCACAGCTGCACGTTCGGATGCCGATGGAGAGCAGGCAGCGGCGGAGGAAGCAGCCGAGCCGGTGTGGTTTCAGcctcaggaggaggaggaggaggaggagcagcagcagcagcaggaggaggtggaggaggtggaggaggaggagtccaACGACGACGGGGCTGAACGTGAGCTACGGGACCAGAATGACGAAGAAGCTAAAGCTGACTATCTACAAATTGACAACGTTGGTGATATTGTGGAGCAGAGTAGCAGCCAGAGCTGGATCGGGAGAGAGTCTCGGGGTGCGGCTCGCGCCTCCACATCGCTGCAGGAGGAGTACGACTTTAAGGAGCTGGCGGAGGAGGAGAAGATCGCTAGAATGAAGGCCAAACTCAGACAGAGCGAAGCTGCCCTCCTTATAATGACAGCTCAGTCCGAGTGAGCAACAGTTCCCTAAACATTCAACTCACGTTAAGATTTTTACCCTTGAACTATGGCTGCTCAGTCCAGAGTGAGAAAAGAACCCCAGCAATGATGCTTTAGATCCCTAAACATTAAACTTACGATAACTAACATCAAAGCTAACTCACggtaaaggacaaatccggcgcaaaatgaacctaggggttaataataGAGATGGcctgataccattttttgcttcctgataccgattccaatacctgaacttgcgtatcggccgataccgag
>XM_039799297.1
ACCGCAACCTCCATCTCAGTTCGTTCGTAATTTTTTAGGAAACGTTAGCGTTACCTAGTAACTAATGAATATCGAAAGTCTGAGCAAATGGTGTCTGTTAAAAACGTAATGGACGTCAGGAACGACACCGCTACATTATCTTCTAGATAGAGAAACATTAACATTGTATGTGACTTTATTTAAACCGTTAAGCCGTTGAAACCAGGACCCAGGAGGGGCGAACTTTAGTGTCCGTTAAGATTTCTTTCCGCTCAGGAAATACACAGAGCATGGATCTCcttggaaaagtggaaatctACATCCCAGTGGACGCTGAGGTGAAAATATTCCCTATGTGGAGTTTACCTAAATCGGTGCTTAAACGAATTGGCCTCCCCCTGTCTGACTCTGAGGGCTCCGGGACGCTCGCAAACTCTCCAGAAGGCATATGTATTTGTCCAGCAATCATACGGAGGAAAGGCCAGAAACTTGTCTCCCACACAGGAAACGGTGGGACAGAAAACACATCGCTGCTGCACACAGAGTTTCGGTCCGGACAGATGTCCTTTGTCTGCCCCAACCGCACAGCTTACAAGGTGCTAAAGGACACCGTGCCTGGGAAAAAGGTCTCTGCGCACACATCTCACACCTCCCAGTTACCTCAGGGCTCTGCGCCGGATAAGTACAAAGATGCCGTCGTCATCTACCATGGACATGTTTACCTGTCCACCAGGAGGTCCAATCACAGCCGGAGTCAACGAGGGACACGTCAACCAAAGCCATCTTCCCACTCCGCCATTCCTAAAAGTTTAAAGAAGCGGCGGTCTCCCCAGGCTCGCCATGATCCTGCAGACAAAGAACTACGAAGGAAGAAATTGCGTGTCACTTTGCCCCAAACCTCCATAAAACCGCTACAGGATCTTCTCACCAAAACAGATAATAACTCCACCACGGACCAGGAGCTGCTACATGACAACATGCCCGAAAAAAACCCCACCGCTTGCAAAGTAACACACGGTGAACACGAGAAGGATGTTTTTACGCACAAGACCGTTGACGTGTCGTCATCCACAGCTGCACGTTCGGATGCCGATGGAGAGCAGGCAGCGGCGGAGGAAGCAGCCGAGCCGGTGTGGTTTCAGcctcaggaggaggaggaggaggaggagcagcagcagcagcaggaggaggtggaggaggtggaggaggaggagtccaACGACGACGGGGCTGAACGTGAGCTACGGGACCAGAATGACGAAGAAGCTAAAGCTGACTATCTACAAATTGACAACGTTGGTGATATTGTGGAGCAGAGTAGCAGCCAGAGCTGGATCGGGAGAGAGTCTCGGGGTGCGGCTCGCGCCTCCACATCGCTGCAGGAGGAGTACGACTTTAAGGAGCTGGCGGAGGAGGAGAAGATCGCTAGAATGAAGGCCAAACTCAGACAGAGCGAAGCTGCCCTCCTTATAATGACAGCTCAGTCCGAGTGAGCAACAGTTCCCTAAACATTCAACTCACGTTAAGATTTTTACCCTTGAACTATGGCTGCTCAGTCCAGAGTGAGAAAAGAACCCCAGCAATGATGCTTTAGATCCCTAAACATTAAACTTACGATAACTAACATCAAAGCTAACTCACggtaaaggacaaatccggcgcaaaatgaacctaggggttaataataGAGATGGcctgataccattttttgcttcctgataccgattccaatacctgaacttgcgtatcggccgataccgagt
>XM_039799298.1
CGAACTATTAGGAAGTCttcaacgttagctagctagtgtcTACATCTTTAAATCCCGGCTCCACCGTGTCCGTCTACCGGGGTGAAGTTAGTTTAATGTTTGACATTTCTTCGGTTTTAATACGTCCGTGTTCAAGTTTCGATTTCGCCCAGTTTTAGGGTATGTTGGAGAGATTTAGGTTTCACAGTGTTGATCGGctcaaaaacaccaaaaaaggaCGTGGAGAACGGAAACTATCTGTCAAACGTGTGCCAGTTAGGGACCGTCGTAAAAGTGCAACCTCAGCCATTTCAATCTTCAATAACTTTTTTTGAAATACACAGAGCATGGATCTCcttggaaaagtggaaatctACATCCCAGTGGACGCTGAGGTGAAAATATTCCCTATGTGGAGTTTACCTAAATCGGTGCTTAAACGAATTGGCCTCCCCCTGTCTGACTCTGAGGGCTCCGGGACGCTCGCAAACTCTCCAGAAGGCATATGTATTTGTCCAGCAATCATACGGAGGAAAGGCCAGAAACTTGTCTCCCACACAGGAAACGGTGGGACAGAAAACACATCGCTGCTGCACACAGAGTTTCGGTCCGGACAGATGTCCTTTGTCTGCCCCAACCGCACAGCTTACAAGGTGCTAAAGGACACCGTGCCTGGGAAAAAGGTCTCTGCGCACACATCTCACACCTCCCAGTTACCTCAGGGCTCTGCGCCGGATAAGTACAAAGATGCCGTCGTCATCTACCATGGACATGTTTACCTGTCCACCAGGAGGTCCAATCACAGCCGGAGTCAACGAGGGACACGTCAACCAAAGCCATCTTCCCACTCCGCCATTCCTAAAAGTTTAAAGAAGCGGCGGTCTCCCCAGGCTCGCCATGATCCTGCAGACAAAGAACTACGAAGGAAGAAATTGCGTGTCACTTTGCCCCAAACCTCCATAAAACCGCTACAGGATCTTCTCACCAAAACAGATAATAACTCCACCACGGACCAGGAGCTGCTACATGACAACATGCCCGAAAAAAACCCCACCGCTTGCAAAGTAACACACGGTGAACACGAGAAGGATGTTTTTACGCACAAGACCGTTGACGTGTCGTCATCCACAGCTGCACGTTCGGATGCCGATGGAGAGCAGGCAGCGGCGGAGGAAGCAGCCGAGCCGGTGTGGTTTCAGcctcaggaggaggaggaggaggaggagcagcagcagcagcaggaggaggtggaggaggtggaggaggaggagtccaACGACGACGGGGCTGAACGTGAGCTACGGGACCAGAATGACGAAGAAGCTAAAGCTGACTATCTACAAATTGACAACGTTGGTGATATTGTGGAGCAGAGTAGCAGCCAGAGCTGGATCGGGAGAGAGTCTCGGGGTGCGGCTCGCGCCTCCACATCGCTGCAGGAGGAGTACGACTTTAAGGAGCTGGCGGAGGAGGAGAAGATCGCTAGAATGAAGGCCAAACTCAGACAGAGCGAAGCTGCCCTCCTTATAATGACAGCTCAGTCCGAGTGAGCAACAGTTCCCTAAACATTCAACTCACGTTAAGATTTTTACCCTTGAACTATGGCTGCTCAGTCCAGAGTGAGAAAAGAACCCCAGCAATGATGCTTTAGATCCCTAAACATTAAACTTACGATAACTAACATCAAAGCTAACTCACggtaaaggacaaatccggcgcaaaatgaacctaggggttaataataGAGATGGcctgataccattttttgcttcctgataccgattccaatacctgaacttgcgtatcggccgataccgagt

Function

NR:

description
uncharacterized protein LOC110532200 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799296.1 False 1593 mRNA 0.51 4 36599574 36606768
XM_039799297.1 False 1742 mRNA 0.50 4 36599573 36606542
XM_039799298.1 True 1799 mRNA 0.50 4 36599573 36606255

Neighbor

gene id symbol gene type direction distance location
igf3 LOC108228312 coding downstream 10861 36581523 ~ 36588712 (-)
plch2a plch2,LOC106935153 coding downstream 151781 36272871 ~ 36447792 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding downstream 329548 36253176 ~ 36270025 (-)
flna LOC100702302 coding downstream 1215344 35311194 ~ 35384229 (-)
emd NA coding downstream 1295558 35298496 ~ 35304015 (-)
lrif1 NA coding upstream 3369 36610137 ~ 36625969 (-)
stk35 LOC105921027,LOC108249422 coding upstream 173533 36780301 ~ 36804670 (-)
gmeb2 gmeb2,LOC102776727 coding upstream 244082 36850850 ~ 36866302 (-)
plod1a NA coding upstream 296309 36903077 ~ 36952279 (-)
LOC120559725 rpl22,LOC102779685,LOC106566811,LOC106572248,LOC100699599,LOC101484027,LOC102785448,LOC103376530,LOC102235575,LOC104936395 coding upstream 447019 37053787 ~ 37061695 (-)
G55662 NA non-coding downstream 1301 36594225 ~ 36598272 (-)
G55664 NA non-coding downstream 3748 36593238 ~ 36595825 (-)
G55670 NA non-coding downstream 47686 36544954 ~ 36551887 (-)
G55666 NA non-coding downstream 56938 36540534 ~ 36542635 (-)
G55658 NA non-coding downstream 87915 36511359 ~ 36511658 (-)
G56162 NA non-coding upstream 7809 36614577 ~ 36615851 (-)
G56167 NA non-coding upstream 51121 36657889 ~ 36699601 (-)
G56155 NA non-coding upstream 76872 36683640 ~ 36712643 (-)
G56190 NA non-coding upstream 145677 36752445 ~ 36752701 (-)
G56191 NA non-coding upstream 145989 36752757 ~ 36753054 (-)
LOC120559361 NA other downstream 39614 36557530 ~ 36559959 (-)
si:ch73-70k4.1 NA other downstream 700837 35874622 ~ 35898736 (-)
G55492 NA other downstream 1189807 35404604 ~ 35409766 (-)
LOC120559165 NA other downstream 1321719 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 2308504 34236566 ~ 34291069 (-)
G56160 NA other upstream 75131 36681899 ~ 36724209 (-)
LOC120559655 mtch1,LOC102799640 other upstream 116470 36723238 ~ 36744132 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other upstream 278035 36884803 ~ 36895540 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other upstream 378117 36984885 ~ 37001151 (-)
G56335 NA other upstream 765867 37372635 ~ 37373316 (-)

Expression


Co-expression Network